Escherichia coli ETEC1731 |
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Putative Escherichia coli ETEC1731 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,971,480 bp | CP122816 |
| plasmid unnamed1: | 91,480 bp | CP122817 |
| plasmid unnamed3: | 91,117 bp | CP122819 |
| plasmid unnamed6: | 99,950 bp | CP122822 |
REBASE acronym: EcoC1731
Org_num: 67346
All begin QDY29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10375 | 380 aa hypothetical protein | |||
| 10380 | M | M.EcoSTEC346ORFGP (100% identity) | M.EcoC1731ORF10380P | |
| 10385 | restriction endonuclease subunit S | |||
| 10390 | restriction endonuclease subunit S | |||
| 10395 | R | EcoW102ORF9650P (97% identity) | EcoC1731ORF10380P | |
| 10400 | SprT family zinc-dependent metalloprotease | |||
| plasmid unnamed6 | ||||
| 26375 | DNA polymerase III subunit theta | |||
| 26380 | M | M.EcoR31ORF22360P (100% identity) | TAAYNNNNNNTTYG | M.EcoC1731ORF26380P |
| 26385 | S | S.EcoR31ORF22360P (100% identity) | TAAYNNNNNNTTYG | S.EcoC1731ORF26380P |
| 26390 | R | EcoR31ORF22360P (26% identity) | TAAYNNNNNNTTYG | EcoC1731ORF26380AP |
| 26395 | IS3-like element IS1203 family transposase | |||
| 26400 | R | EcoR31ORF22360P (73% identity) | TAAYNNNNNNTTYG | EcoC1731ORF26380BP |
| 26405 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1755 | cell division protein DamX | |||
| 1760 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC1731DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2380 | DUF2556 family protein | |||
| 2385 | M | M.EcoQ4552ORF9480P (100% identity) | M.EcoC1731ORF2385P | |
| 2390 | DNA-binding transcriptional regulator Fis | |||
| 10060 | HD domain-containing protein | |||
| 10065 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC1731DcmP |
| 10070 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC1731DcmP |
| 10075 | drug/metabolite exporter YedA | |||
| 21235 | LacI family DNA-binding transcriptional | |||
| 21240 | M | M.Eco31SOC04SspBP (94% identity) | M.EcoC1731SspBP | |
| 21245 | M | M.EcoC1747SspCP (100% identity) | M.EcoC1731SspCP | |
| 21250 | M | M.EcoC1747SspDP (100% identity) | M.EcoC1731SspDP | |
| 21255 | 614 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 24575 | group II intron reverse transcriptase/maturase | |||
| 24580 | M | M.EcosW25KORF25595P (100% identity) | M.EcoC1731ORF24580P | |
| 24585 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 25550 | 73 aa hypothetical protein | |||
| 25555 | M | M.SflN101ORF24625P (100% identity) | M.EcoC1731ORF25555P | |
| 25560 | 103 aa hypothetical protein | |||
| plasmid unnamed6 | ||||
| 26510 | 55 aa hypothetical protein | |||
| 26515 | M | M.EcoDEC7DORF464P (100% identity) | M.EcoC1731ORF26515P | |
| 26520 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14340 | isocitrate/isopropylmalate family dehydrogenase | |||
| 14345 | R | EmaE2C08McrCP (100% identity) | EcoC1731McrCP | |
| 14350 | R | EcoteDMcrBP (100% identity) | EcoC1731McrBP | |
| 14355 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6045 | TraR/DksA family transcriptional regulator | |||
| 6050 | M | M.EcoTX1999ORF3129P (100% identity) | GATC | M.EcoC1731ORF6050P |
| 6055 | replication endonuclease | |||