Escherichia coli ETEC1729 |
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Putative Escherichia coli ETEC1729 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,995,289 bp | CP122837 |
| plasmid unnamed1: | 94,250 bp | CP122838 |
| plasmid unnamed2: | 218,932 bp | CP122839 |
| plasmid unnamed6: | 96,346 bp | CP122843 |
REBASE acronym: EcoC1729
Org_num: 67344
All begin QDW97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3775 | 122 aa hypothetical protein | |||
| 3780 | R | EcoEC521ORF29600P (100% identity) | EcoC1729ORF3790P | |
| 3785 | S | S.EcoEC521ORF29600P (100% identity) | S.EcoC1729ORF3790P | |
| 3790 | M | M.EcoEC521ORF29600P (100% identity) | M.EcoC1729ORF3790P | |
| 3795 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 355 | osmoprotectant transport activator ProQ | |||
| 360 | M | M.SflFF24DndBP (100% identity) | M.EcoC1729DndBP | |
| 365 | DNA phosphorothioation system sulfurtransferase | |||
| 360 | DNA sulfur modification protein DndB | |||
| 365 | M | M.SflFF24DndCP (100% identity) | M.EcoC1729DndCP | |
| 370 | DNA sulfur modification protein DndD | |||
| 365 | DNA phosphorothioation system sulfurtransferase | |||
| 370 | M | M.SflFF24DndDP (100% identity) | M.EcoC1729DndDP | |
| 375 | DNA sulfur modification protein DndE | |||
| 370 | DNA sulfur modification protein DndD | |||
| 375 | M | M.SflFF24DndEP (100% identity) | M.EcoC1729DndEP | |
| 380 | DGQHR domain-containing protein | |||
| 390 | accessory gene regulator B family protein | |||
| 395 | R | EcosEC5DptHP (99% identity) | EcoC1729DptHP | |
| 400 | DNA phosphorothioation-dependent restriction | |||
| 395 | DNA phosphorothioation-dependent restriction | |||
| 400 | R | SflFF24DptGP (100% identity) | EcoC1729DptGP | |
| 405 | DNA phosphorothioation-dependent restriction | |||
| 400 | DNA phosphorothioation-dependent restriction | |||
| 405 | R | SflFF24DptFP (100% identity) | EcoC1729DptFP | |
| 410 | integrase | |||
| 2025 | cell division protein DamX | |||
| 2030 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC1729DamP |
| 2035 | ribulose-phosphate 3-epimerase | |||
| 2555 | DUF2556 family protein | |||
| 2560 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.EcoC1729ORF2560P |
| 2565 | DNA-binding transcriptional regulator Fis | |||
| 9650 | phosphohydrolase | |||
| 9655 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC1729DcmP |
| 9660 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC1729DcmP |
| 9665 | drug/metabolite exporter YedA | |||
| 18210 | DUF1317 family protein | |||
| 18215 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoC1729ORF18215P |
| 18220 | cell division protein ZapA | |||
| 18465 | DUF1317 family protein | |||
| 18470 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoC1729ORF18470P |
| 18475 | cell division protein ZapA | |||
| plasmid unnamed1 | ||||
| 24595 | group II intron reverse transcriptase/maturase | |||
| 24600 | M | M.EcosW25KORF25595P (100% identity) | M.EcoC1729ORF24600P | |
| 24605 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25160 | 55 aa hypothetical protein | |||
| 25165 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoC1729ORF25165P |
| 25170 | thermonuclease family protein | |||
| 25475 | DNA-binding protein | |||
| 25480 | M | M.YpsF1ORFDP (95% identity) | M.EcoC1729ORF25480P | |
| 25485 | 277 aa hypothetical protein | |||
| plasmid unnamed6 | ||||
| 26845 | 73 aa hypothetical protein | |||
| 26850 | M | M.StyR64ORFAP (100% identity) | M.EcoC1729ORF26850P | |
| 26855 | 103 aa hypothetical protein | |||