Escherichia coli ETEC4074 |
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Putative Escherichia coli ETEC4074 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,975,958 bp | CP122655 |
| plasmid unnamed2: | 83,893 bp | CP122657 |
REBASE acronym: Eco4074
Org_num: 67372
All begin QDW60_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1840 | cell division protein DamX | |||
| 1845 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4074DamP |
| 1850 | ribulose-phosphate 3-epimerase | |||
| 2465 | DUF2556 family protein | |||
| 2470 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco4074ORF2470P |
| 2475 | DNA-binding transcriptional regulator Fis | |||
| 5265 | 494 aa hypothetical protein | |||
| 5270 | M | M.Ema814ORF20625P (100% identity) | M.Eco4074ORF5270P | |
| 5275 | R | Eco4064ORF5265P (100% identity) | Eco4074ORF5270P | |
| 5280 | 59 aa hypothetical protein | |||
| 9310 | phosphohydrolase | |||
| 9315 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco4074DcmP |
| 9320 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco4074DcmP |
| 9325 | drug/metabolite exporter YedA | |||
| 21040 | BREX-1 system phosphatase PglZ type A | |||
| 21045 | RM | EcoC1746ORF20650P (100% identity) | Eco4074ORF21045P | |
| 21050 | BREX system P-loop protein BrxC | |||
| 21870 | integrase | |||
| 21875 | R | EcoSTEC413ORF4260P (100% identity) | GAAC | Eco4074ORF21875P |
| 21880 | ISL3 family transposase | |||
| plasmid unnamed2 | ||||
| 25245 | 97 aa hypothetical protein | |||
| 25250 | M | M.Sen527ORF25750P (100% identity) | M.Eco4074ORF25250P | |
| 25255 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 345 | zinc ribbon protein | |||
| 350 | R | Kpn0718McrBP (100% identity) | Eco4074McrBP | |
| 355 | R | SflN97McrCP (100% identity) | Eco4074McrCP | |
| 360 | IS3-like element ISSen4 family transposase | |||
| 20835 | IS1-like element IS1A family transposase | |||
| 20840 | R | SflLIN8GmrSDP (42% identity) | Eco4074GmrSP | |
| 20845 | cytoplasmic protein | |||