Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)

REBASE ref # 36777

Sequence length:GenBank #:
Chromosome: 5,067,014 bp CP122676
plasmid unnamed2: 95,101 bp CP122678

REBASE acronym: EcoC4070

Org_num: 67368

 

All begin QDW57_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
5805 IS1 family transposase
5810 R Sen12509ORF5865P (100% identity) ACAYNNNNCTG EcoC4070ORF5820P
5815 S S.Sen12509ORF5865P (100% identity) ACAYNNNNCTG S.EcoC4070ORF5820P
5820 M M.SenS688ORF13495P (100% identity) ACAYNNNNCTG M.EcoC4070ORF5820P
5825 integrase core domain-containing protein
 
15360 GTPase family protein
15365 M M.EcoW1316ORF930P (100% identity) M.EcoC4070ORF15365P
15370 S S.EcoW1316ORF930P (100% identity) S.EcoC4070ORF15365P
15375 R EcoW1316ORF930P (100% identity) EcoC4070ORF15365P
15380 IS5-like element ISKpn26 family transposase
 
19615 type IV toxin-antitoxin system AbiEi family
19620 R EcoP1525ORF5305P (100% identity) CAACNNNNGTT EcoC4070ORF19625P
19625 M M.EcoW1316ORF21120P (100% identity) CAACNNNNGTT M.EcoC4070ORF19625P
19630 S S.Eco4077ORF19880P (100% identity) CAACNNNNGTT S.EcoC4070ORF19625P
19635 ash family protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1785 cell division protein DamX
1790 M M.SspPIBDamP (100% identity) GATC M.EcoC4070DamP
1795 ribulose-phosphate 3-epimerase
 
2315 DUF2556 family protein
2320 M M.EcoW1316ORF13330P (100% identity) ATGCAT M.EcoC4070ORF2320P
2325 DNA-binding transcriptional regulator Fis
 
6455 DUF1382 family protein
6460 M M.SspPIBORF6330P (100% identity) GATC M.EcoC4070ORF6460P
6465 PerC family transcriptional regulator
 
12105 DUF977 family protein
12110 M M.EcoC4071ORF12110P (100% identity) M.EcoC4070ORF12110P
12115 139 aa hypothetical protein
 
14080 Shiga toxin Stx2e subunit A
14100 M M.EcoW1316ORF2195P (100% identity) M.EcoC4070ORF14100P
14105 TrmB family transcriptional regulator
 
15780 92 aa hypothetical protein
15785 M M.EcoW26ORF35400P (100% identity) M.EcoC4070ORF15785P
15790 TrmB family transcriptional regulator
 
plasmid unnamed2
 
25280 73 aa hypothetical protein
25285 M M.StyR64ORFAP (100% identity) M.EcoC4070ORF25285P
25290 103 aa hypothetical protein
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