Escherichia coli ETEC4068 |
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Putative Escherichia coli ETEC4068 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,983,177 bp | CP122681 |
| plasmid unnamed3: | 61,823 bp | CP122684 |
REBASE acronym: Eco4068
Org_num: 67366
All begin QDW67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3355 | IS3-like element IS3 family transposase | |||
| 3360 | M | M.Eco4075ORF3360P (100% identity) | ACTNNNNNNRTCG | M.Eco4068ORF3360P |
| 3365 | S | S.EcoB8S56ORF27280P (100% identity) | ACTNNNNNNRTCG | S.Eco4068ORF3360P |
| 3370 | DUF4268 domain-containing protein | |||
| 3375 | R | Eco4075ORF3360P (100% identity) | ACTNNNNNNRTCG | Eco4068ORF3360P |
| 3380 | transposase | |||
| 5985 | IS1 family transposase | |||
| 5990 | M | M.Eco4075ORF5985P (100% identity) | M.Eco4068ORF5990P | |
| 5995 | integrase core domain-containing protein | |||
| 19170 | type IV toxin-antitoxin system AbiEi family | |||
| 19175 | R | EcoP1525ORF5305P (100% identity) | CAACNNNNGTT | Eco4068ORF19180P |
| 19180 | M | M.EcoW1316ORF21120P (100% identity) | CAACNNNNGTT | M.Eco4068ORF19180P |
| 19185 | S | S.EcoW1316ORF21120P (100% identity) | CAACNNNNGTT | S.Eco4068ORF19180P |
| 19190 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4068DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.EcoW1316ORF13330P (100% identity) | ATGCAT | M.Eco4068ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 6625 | DUF1382 family protein | |||
| 6630 | M | M.Eco4075ORF6875P (100% identity) | M.Eco4068ORF6630P | |
| 6635 | PerC family transcriptional regulator | |||
| 9825 | phosphohydrolase | |||
| 9830 | M | M.EcoW1316DcmP (100% identity) | CCWGG | M.Eco4068DcmP |
| 9835 | V | V.EcoW1316DcmP (100% identity) | V.Eco4068DcmP | |
| 9840 | drug/metabolite exporter YedA | |||
| 11940 | DUF977 family protein | |||
| 11945 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco4068ORF11945P | |
| 11950 | 139 aa hypothetical protein | |||
| 13635 | Shiga toxin Stx2e subunit A | |||
| 13655 | M | M.EcoW1316ORF2195P (100% identity) | M.Eco4068ORF13655P | |
| 13660 | TrmB family transcriptional regulator | |||
| plasmid unnamed3 | ||||
| 24820 | 101 aa hypothetical protein | |||
| 24825 | M | M.EcoC1745ORF28570P (100% identity) | M.Eco4068ORF24825P | |
| 24830 | 73 aa hypothetical protein | |||