Escherichia coli ETEC4064 |
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Putative Escherichia coli ETEC4064 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,975,989 bp | CP122695 |
| plasmid unnamed2: | 83,893 bp | CP122697 |
REBASE acronym: Eco4064
Org_num: 67363
All begin QDW59_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1835 | cell division protein DamX | |||
| 1840 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4064DamP |
| 1845 | ribulose-phosphate 3-epimerase | |||
| 2460 | DUF2556 family protein | |||
| 2465 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco4064ORF2465P |
| 2470 | DNA-binding transcriptional regulator Fis | |||
| 5260 | 494 aa hypothetical protein | |||
| 5265 | M | M.Ema814ORF20625P (100% identity) | M.Eco4064ORF5265P | |
| 5270 | R | Eco4074ORF5270P (100% identity) | Eco4064ORF5265P | |
| 5275 | 59 aa hypothetical protein | |||
| 9300 | phosphohydrolase | |||
| 9305 | M | M.SflFF59DcmP (99% identity) | CCWGG | M.Eco4064DcmP |
| 9310 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco4064DcmP |
| 9315 | drug/metabolite exporter YedA | |||
| 21015 | BREX-1 system phosphatase PglZ type A | |||
| 21020 | RM | EcoC1746ORF20650P (100% identity) | Eco4064ORF21020P | |
| 21025 | BREX system P-loop protein BrxC | |||
| 21835 | integrase | |||
| 21840 | R | EcoSTEC413ORF4260P (100% identity) | GAAC | Eco4064ORF21840P |
| 21845 | ISL3 family transposase | |||
| plasmid unnamed2 | ||||
| 25250 | 97 aa hypothetical protein | |||
| 25255 | M | M.Sen527ORF25750P (100% identity) | M.Eco4064ORF25255P | |
| 25260 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 345 | zinc ribbon protein | |||
| 350 | R | Kpn0718McrBP (100% identity) | Eco4064McrBP | |
| 355 | R | SflN97McrCP (100% identity) | Eco4064McrCP | |
| 360 | IS3-like element ISSen4 family transposase | |||
| 20810 | IS1-like element IS1A family transposase | |||
| 20815 | R | SflLIN8GmrSDP (42% identity) | Eco4064GmrSP | |
| 20820 | cytoplasmic protein | |||