Escherichia coli ETEC1745 |
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Putative Escherichia coli ETEC1745 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,251,932 bp | CP122740 |
| plasmid unnamed1: | 66,207 bp | CP122741 |
| plasmid unnamed2: | 12,240 bp | CP122742 |
| plasmid unnamed7: | 90,908 bp | CP122747 |
| plasmid unnamed9: | 136,821 bp | CP122749 |
REBASE acronym: EcoC1745
Org_num: 67357
All begin QDY25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3875 | 122 aa hypothetical protein | |||
| 3880 | R | EcoEC521ORF29600P (99% identity) | EcoC1745ORF3890P | |
| 3885 | S | S.EcoC1737ORF5555P (100% identity) | S.EcoC1745ORF3890P | |
| 3890 | M | M.EcoC1736FORF5590P (99% identity) | M.EcoC1745ORF3890P | |
| 3895 | GTPase family protein | |||
| 22530 | DUF262 domain-containing HNH endonuclease family | |||
| 22535 | R | EcoXH993ORF23720P (100% identity) | EcoC1745ORF22540P | |
| 22540 | M | M.EcoUM1887ORF20145P (100% identity) | M.EcoC1745ORF22540P | |
| 22545 | S | S.EcoC1744ORF22465P (100% identity) | S.EcoC1745ORF22540P | |
| 22550 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 380 | osmoprotectant transport activator ProQ | |||
| 385 | M | M.EcoSTEC507DndBP (99% identity) | M.EcoC1745DndBP | |
| 390 | DNA phosphorothioation system sulfurtransferase | |||
| 385 | DNA sulfur modification protein DndB | |||
| 390 | M | M.SflFF24DndCP (99% identity) | M.EcoC1745DndCP | |
| 395 | DNA sulfur modification protein DndD | |||
| 390 | DNA phosphorothioation system sulfurtransferase | |||
| 395 | M | M.SflFF24DndDP (100% identity) | M.EcoC1745DndDP | |
| 400 | DNA sulfur modification protein DndE | |||
| 395 | DNA sulfur modification protein DndD | |||
| 400 | M | M.SflFF24DndEP (100% identity) | M.EcoC1745DndEP | |
| 405 | DNA phosphorothioation-associated DGQHR protein | |||
| 410 | 172 aa hypothetical protein | |||
| 415 | R | EcoC1744DptHP (99% identity) | EcoC1745DptHP | |
| 420 | DNA phosphorothioation-dependent restriction | |||
| 415 | DNA phosphorothioation-dependent restriction | |||
| 420 | R | SenLY67DptGP (100% identity) | EcoC1745DptGP | |
| 425 | DNA phosphorothioation-dependent restriction | |||
| 420 | DNA phosphorothioation-dependent restriction | |||
| 425 | R | SenLY67DptFP (100% identity) | EcoC1745DptFP | |
| 430 | integrase | |||
| 2020 | cell division protein DamX | |||
| 2025 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC1745DamP |
| 2030 | ribulose-phosphate 3-epimerase | |||
| 2645 | DUF2556 family protein | |||
| 2650 | M | M.Eco4063ORF10240P (100% identity) | ATGCAT | M.EcoC1745ORF2650P |
| 2655 | DNA-binding transcriptional regulator Fis | |||
| 6175 | adhesin-like autotransporter YpjA/EhaD | |||
| 6180 | R | SenB82ORF5360P (100% identity) | EcoC1745ORF6180P | |
| 6185 | primase-like DNA-binding domain-containing | |||
| 6360 | TrmB family transcriptional regulator | |||
| 6365 | M | M.EcoC1744ORF6450P (99% identity) | M.EcoC1745ORF6365P | |
| 6375 | 132 aa hypothetical protein | |||
| 10570 | phosphohydrolase | |||
| 10575 | M | M.Eco11473DcmP (99% identity) | CCWGG | M.EcoC1745DcmP |
| ??? | V | V.Eco4063DcmP (93% identity) | V.EcoC1745DcmP | |
| 10585 | drug/metabolite exporter YedA | |||
| 12870 | DUF977 family protein | |||
| 12875 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC1745ORF12875P | |
| 12880 | 60 aa hypothetical protein | |||
| 20655 | RusA family crossover junction | |||
| 20660 | M | M.EcoECO21ORF17780P (99% identity) | GATC | M.EcoC1745ORF20660P |
| 20665 | PerC family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 26490 | 103 aa hypothetical protein | |||
| 26495 | M | M.EcoC1745ORF28570P (100% identity) | M.EcoC1745ORF26495P | |
| 26500 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 26695 | MbeD family mobilization/exclusion protein | |||
| 26700 | M | M.EcoH591ORF4942P (100% identity) | GGYRCC | M.EcoC1745ORF26700P |
| 26705 | R | Eco4063ORF26425P (91% identity) | GGYRCC | EcoC1745ORF26700P |
| 26710 | IS91 family transposase | |||
| plasmid unnamed7 | ||||
| 27085 | 73 aa hypothetical protein | |||
| 27090 | M | M.SenSL0048ORF23875P (100% identity) | M.EcoC1745ORF27090P | |
| 27095 | 103 aa hypothetical protein | |||
| plasmid unnamed9 | ||||
| 28565 | 73 aa hypothetical protein | |||
| 28570 | M | M.EcoC1745ORF26495P (100% identity) | M.EcoC1745ORF28570P | |
| 28575 | 103 aa hypothetical protein | |||