Escherichia coli ETEC1722 |
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Putative Escherichia coli ETEC1722 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,694,702 bp | CP122844 |
| plasmid unnamed3: | 105,315 bp | CP122847 |
| plasmid unnamed4: | 98,832 bp | CP122848 |
| plasmid unnamed7: | 107,571 bp | CP122851 |
REBASE acronym: EcoC1722
Org_num: 67342
All begin QDX00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3315 | transposase domain-containing protein | |||
| 3320 | M | M.EcoC1739ORF3335P (100% identity) | AGGNNNNNRTTG | M.EcoC1722ORF3320P |
| 3325 | AAA family ATPase | |||
| 3330 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.EcoC1722ORF3320P |
| 3335 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | EcoC1722ORF3320P |
| 3340 | IS3 family transposase | |||
| plasmid unnamed4 | ||||
| 24065 | type II toxin-antitoxin system Phd/YefM family | |||
| 24070 | M | M.EcoC1720ORF24265P (100% identity) | M.EcoC1722ORF24070P | |
| 24075 | S | S.EcoC1720ORF24265P (100% identity) | S.EcoC1722ORF24070P | |
| 24080 | R | EcoC1720ORF24265P (100% identity) | EcoC1722ORF24070P | |
| 24085 | 44 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1610 | cell division protein DamX | |||
| 1615 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC1722DamP |
| 1620 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoC1722ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 9090 | HD domain-containing protein | |||
| 9095 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC1722DcmP |
| 9100 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC1722DcmP |
| 9105 | drug/metabolite exporter YedA | |||
| 11260 | DUF977 family protein | |||
| 11265 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC1722ORF11265P | |
| 11270 | 139 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 23745 | 101 aa hypothetical protein | |||
| 23750 | M | M.SenBR027ORFEP (100% identity) | SAY | M.EcoC1722ORF23750P |
| 23755 | 73 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 24185 | tellurite/colicin resistance protein | |||
| 24200 | M | M.EcoC1720ORF24390P (100% identity) | M.EcoC1722ORF24200P | |
| 24205 | recombination-associated protein RdgC | |||
| plasmid unnamed7 | ||||
| 25515 | 103 aa hypothetical protein | |||
| 25520 | M | M.EcoXJ61ORF24590P (100% identity) | M.EcoC1722ORF25520P | |
| 25525 | 73 aa hypothetical protein | |||