Escherichia coli ETEC1721 |
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Putative Escherichia coli ETEC1721 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,766,922 bp | CP122868 |
| plasmid unnamed1: | 6,968 bp | CP122869 |
| plasmid unnamed3: | 112,141 bp | CP122871 |
REBASE acronym: EcoC1721
Org_num: 67341
All begin QDX04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19980 | DUF4942 domain-containing protein | |||
| 19985 | M | M.EcoW26ORF3070P (100% identity) | CCANNNNNNCTC | M.EcoC1721ORF19985P |
| 19990 | S | S.SdyFF10ORF20075P (100% identity) | CCANNNNNNCTC | S.EcoC1721ORF19985P |
| 19995 | R | SdyFF10ORF20075P (100% identity) | CCANNNNNNCTC | EcoC1721ORF19985P |
| 20005 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1855 | cell division protein DamX | |||
| 1860 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC1721DamP |
| 1865 | ribulose-phosphate 3-epimerase | |||
| 2410 | DUF2556 family protein | |||
| 2415 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoC1721ORF2415P |
| 2420 | DNA-binding transcriptional regulator Fis | |||
| 19515 | LexA family transcriptional regulator | |||
| 19520 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoC1721ORF19520P |
| 19525 | PerC family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 23115 | R | Sen64991ORFAP (100% identity) | GRCGYC | EcoC1721ORF23160P |
| 23120 | 127 aa hypothetical protein | |||
| 23125 | 68 aa hypothetical protein | |||
| 23130 | MbeD family mobilization/exclusion protein | |||
| 23135 | MbeB family mobilization protein | |||
| 23140 | relaxase/mobilization nuclease domain-containing | |||
| 23145 | MobC family plasmid mobilization relaxosome | |||
| 23150 | Rop family plasmid primer RNA-binding protein | |||
| 23155 | replication initiation protein | |||
| 23160 | M | M.Sen64991ORFAP (95% identity) | M.EcoC1721ORF23160P | |
| plasmid unnamed3 | ||||
| 23880 | group II intron reverse transcriptase/maturase | |||
| 23885 | M | M.EcosW25KORF25595P (100% identity) | M.EcoC1721ORF23885P | |
| 23890 | 73 aa hypothetical protein | |||