Escherichia coli ETEC1718 |
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Putative Escherichia coli ETEC1718 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
Complete sequence: 5,122,547 bp
GenBank #: CP122872
REBASE acronym: EcoC1718
Org_num: 67339
All begin QDX06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10030 | 388 aa hypothetical protein | |||
| 10035 | M | M.EcoC1730ORF9820P (100% identity) | M.EcoC1718ORF10035P | |
| 10040 | S | S1.EcoC1730ORF9820P (100% identity) | S1.EcoC1718ORF10035P | |
| 10045 | YecA family protein | |||
| 10050 | R | EcoC1730ORF9820P (100% identity) | EcoC1718ORF10035P | |
| 10055 | SprT family zinc-dependent metalloprotease | |||
| 22480 | IS3-like element IS3 family transposase | |||
| 22485 | S | S.EcoC1717ORF22495P (100% identity) | S.EcoC1718ORF22485P | |
| 22490 | R | EcoYPE3ORF20380P (100% identity) | EcoC1718ORF22485P | |
| 22500 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1875 | cell division protein DamX | |||
| 1880 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC1718DamP |
| 1885 | ribulose-phosphate 3-epimerase | |||
| 2515 | DUF2556 family protein | |||
| 2520 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC1718ORF2520P |
| 2525 | DNA-binding transcriptional regulator Fis | |||
| 5895 | PerC family transcriptional regulator | |||
| 5900 | M | M.EcoT761ORF20590P (100% identity) | GATC | M.EcoC1718ORF5900P |
| 5905 | LexA family transcriptional regulator | |||
| 5930 | 95 aa hypothetical protein | |||
| 5935 | M | M.EcoC1730ORF5625P (100% identity) | M.EcoC1718ORF5935P | |
| 5940 | phage holin, lambda family | |||
| 6100 | 257 aa hypothetical protein | |||
| 6105 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.EcoC1718ORF6105P |
| 6110 | R | EcoYPE3ORF18250P (100% identity) | CCWGG | EcoC1718ORF6105P |
| 6115 | primase-like DNA-binding domain-containing | |||
| 9700 | phosphohydrolase | |||
| 9705 | M | M.EcoC1730DcmP (100% identity) | CCWGG | M.EcoC1718DcmP |
| 9710 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC1718DcmP |
| 9715 | drug/metabolite exporter YedA | |||
| 14365 | Shiga toxin Stx2e subunit A | |||
| 14385 | M | M.EcoC1730ORF14040P (100% identity) | M.EcoC1718ORF14385P | |
| 14390 | TrmB family transcriptional regulator | |||
| 20270 | tellurite resistance TerB family protein | |||
| 20285 | M | M.EcoC1730ORF19935P (100% identity) | M.EcoC1718ORF20285P | |
| 20290 | ISL3-like element ISKox3 family transposase | |||
| 21950 | phage lysis protein EssD | |||
| 21955 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC1718ORF21955P | |
| 21960 | 67 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22465 | HNH endonuclease | |||
| 22470 | R | EcoYPE3McrCP (100% identity) | EcoC1718McrCP | |
| 22475 | ATP-binding protein | |||