Escherichia coli ETEC1716 |
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Putative Escherichia coli ETEC1716 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,043,942 bp | CP122880 |
| plasmid unnamed1: | 118,236 bp | CP122881 |
| plasmid unnamed2: | 93,572 bp | CP122882 |
| plasmid unnamed4: | 123,715 bp | CP122884 |
REBASE acronym: Eco1716
Org_num: 67337
All begin QDX09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21820 | adenine/cytosine-specific restriction | |||
| 21825 | R | Ecos15955ORF12100P (99% identity) | Eco1716ORF21830P | |
| 21830 | M | M.Ecos15955ORF12100P (100% identity) | M.Eco1716ORF21830P | |
| 21835 | S | S.Ecos15955ORF12100P (99% identity) | S.Eco1716ORF21830P | |
| 21840 | 23 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25815 | type II toxin-antitoxin system Phd/YefM family | |||
| 25820 | M | M.EcoP136ORF28155P (99% identity) | M.Eco1716ORF25820P | |
| 25825 | S | S.EcoP136ORF28155P (66% identity) | S.Eco1716ORF25820P | |
| 25830 | R | Eco16C11ORF28060P (99% identity) | Eco1716ORF25820P | |
| 25835 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1716DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco1716ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 6230 | PerC family transcriptional regulator | |||
| 6235 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco1716ORF6235P |
| 6240 | LexA family transcriptional regulator | |||
| 6290 | 257 aa hypothetical protein | |||
| 6295 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco1716ORF6295P |
| 6300 | R | Sso8033ORF3755P (99% identity) | CCWGG | Eco1716ORF6295P |
| 6305 | 121 aa hypothetical protein | |||
| 7355 | serine/threonine protein phosphatase | |||
| 7360 | M | M.EcoZ151ORF6750P (99% identity) | M.Eco1716ORF7360P | |
| 7365 | PerC family transcriptional regulator | |||
| 10510 | phosphohydrolase | |||
| 10515 | M | M.EcoP136DcmP (100% identity) | CCWGG | M.Eco1716DcmP |
| 10520 | V | V.EcoP136DcmP (100% identity) | V.Eco1716DcmP | |
| 10525 | drug/metabolite exporter YedA | |||
| 12495 | DUF977 family protein | |||
| 12500 | M | M.EcoC4072ORF23345P (100% identity) | M.Eco1716ORF12500P | |
| 12505 | 139 aa hypothetical protein | |||
| 21560 | LexA family transcriptional regulator | |||
| 21565 | M | M.Sso30ORF925P (100% identity) | GATC | M.Eco1716ORF21565P |
| 21570 | PerC family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 25625 | 103 aa hypothetical protein | |||
| 25630 | M | M.StyR64ORFAP (100% identity) | M.Eco1716ORF25630P | |
| 25635 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25920 | SPFH domain-containing protein | |||
| 25935 | M | M.Eco1466ORF4548P (100% identity) | M.Eco1716ORF25935P | |
| 25940 | recombination-associated protein RdgC | |||
| plasmid unnamed4 | ||||
| 27120 | 73 aa hypothetical protein | |||
| 27125 | M | M.Ecocq9ORF29710P (100% identity) | M.Eco1716ORF27125P | |
| 27130 | 103 aa hypothetical protein | |||