Escherichia coli ETEC1715 |
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Putative Escherichia coli ETEC1715 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,652,502 bp | CP122886 |
| plasmid unnamed3: | 107,014 bp | CP122889 |
| plasmid unnamed4: | 103,334 bp | CP122890 |
| plasmid unnamed8: | 5,651 bp | CP122894 |
REBASE acronym: Eco1715
Org_num: 67336
All begin QDX13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3315 | transposase domain-containing protein | |||
| 3320 | M | M.EcoC1739ORF3335P (100% identity) | AGGNNNNNRTTG | M.Eco1715ORF3320P |
| 3325 | AAA family ATPase | |||
| 3330 | S | S.EcoC1735ORF3330P (100% identity) | AGGNNNNNRTTG | S.Eco1715ORF3320P |
| 3335 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | Eco1715ORF3320P |
| 3340 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1610 | cell division protein DamX | |||
| 1615 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1715DamP |
| 1620 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.EcoC4072ORF14300P (100% identity) | ATGCAT | M.Eco1715ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 8835 | HD domain-containing protein | |||
| 8840 | M | M.EcoC1745DcmP (99% identity) | CCWGG | M.Eco1715DcmP |
| 8845 | V | V.SflSTLE3DcmP (96% identity) | V.Eco1715DcmP | |
| 8850 | drug/metabolite exporter YedA | |||
| plasmid unnamed3 | ||||
| 23660 | 103 aa hypothetical protein | |||
| 23665 | M | M.EcoXJ61ORF24590P (100% identity) | M.Eco1715ORF23665P | |
| 23670 | 73 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 23805 | 73 aa hypothetical protein | |||
| 23810 | M | M.SspPIBORF23080P (100% identity) | M.Eco1715ORF23810P | |
| 23815 | 103 aa hypothetical protein | |||
| plasmid unnamed8 | ||||
| 25200 | R | SenUA39ORF5P (100% identity) | GGYRCC | Eco1715ORF25205P |
| 25205 | M | M.EcoH591ORF4942P (99% identity) | M.Eco1715ORF25205P | |
| 25210 | MbeD family mobilization/exclusion protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13065 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13070 | R | EcoC1739McrCP (100% identity) | Eco1715McrCP | |
| 13075 | R | EcoUKMcrBP (100% identity) | Eco1715McrBP | |
| 13080 | recombinase family protein | |||