Escherichia coli AVS0366 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli AVS0366 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,082,752 bp | CP124513 |
| plasmid pAVS0366-A: | 138,219 bp | CP124514 |
REBASE acronym: EcoS0366
Org_num: 67290
All begin QJP86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18600 | type IV toxin-antitoxin system AbiEi family | |||
| 18605 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0366ORF18610P |
| 18610 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0366ORF18610P |
| 18615 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0366ORF18610P |
| 18620 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0366DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0366ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 10180 | phosphohydrolase | |||
| 10185 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0366DcmP |
| 10190 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0366DcmP |
| 10195 | drug/metabolite exporter YedA | |||
| 14380 | DUF3927 family protein | |||
| 14395 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoS0366ORF14395P |
| 14400 | TrmB family transcriptional regulator | |||
| 20540 | McrC family protein | |||
| 20545 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0366ORF20550P |
| 20550 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0366ORF20550P |
| 20555 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0366ORF20550P |
| 20560 | helix-turn-helix domain-containing protein | |||
| 20825 | 174 aa hypothetical protein | |||
| 20830 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoS0366ORF20830P |
| 20835 | ATP-binding protein | |||
| 20840 | response regulator receiver domain | |||
| 20845 | R | Ecos19ORF20635P (100% identity) | EcoS0366ORF20845P | |
| 20850 | 97 aa hypothetical protein | |||
| 21820 | response regulator receiver domain | |||
| 21825 | R | EcosS3ORF15775P (100% identity) | EcoS0366ORF21830P | |
| 21830 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS0366ORF21830P | |
| 21835 | conjugal transfer protein TraG N-terminal | |||
| plasmid pAVS0366-A | ||||
| 25340 | 73 aa hypothetical protein | |||
| 25345 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0366ORF25345P |
| 25350 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9980 | shufflon system plasmid conjugative transfer | |||
| 9985 | R | Ecost88ORF24685P (100% identity) | EcoS0366ORF9990P | |
| 9990 | M | M.EcosS2ORF3675P (100% identity) | M.EcoS0366ORF9990P | |
| 9995 | SpnT protein | |||