Escherichia coli AVS0750 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli AVS0750 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,039,061 bp | CP124506 |
| plasmid pAVS0750-A: | 145,535 bp | CP124507 |
REBASE acronym: EcoS0750
Org_num: 67311
All begin QJP88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18535 | type IV toxin-antitoxin system AbiEi family | |||
| 18540 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0750ORF18545P |
| 18545 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0750ORF18545P |
| 18550 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0750ORF18545P |
| 18555 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0750DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 10140 | phosphohydrolase | |||
| 10145 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0750DcmP |
| 10150 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0750DcmP |
| 10155 | drug/metabolite exporter YedA | |||
| 14315 | DUF3927 family protein | |||
| 14330 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoS0750ORF14330P |
| 14335 | TrmB family transcriptional regulator | |||
| 20465 | McrC family protein | |||
| 20470 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0750ORF20475P |
| 20475 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0750ORF20475P |
| 20480 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0750ORF20475P |
| 20485 | helix-turn-helix domain-containing protein | |||
| 20750 | response regulator receiver domain | |||
| 20755 | R | Ecos19ORF20635P (100% identity) | EcoS0750ORF20755P | |
| 20760 | 97 aa hypothetical protein | |||
| 21725 | response regulator receiver domain | |||
| 21730 | R | EcosS3ORF15775P (100% identity) | EcoS0750ORF21735P | |
| 21735 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS0750ORF21735P | |
| 21740 | conjugal transfer protein TraG N-terminal | |||
| plasmid pAVS0750-A | ||||
| 25285 | 73 aa hypothetical protein | |||
| 25290 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0750ORF25290P |
| 25295 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9940 | shufflon system plasmid conjugative transfer | |||
| 9945 | R | Ecost88ORF24685P (100% identity) | EcoS0750ORF9950P | |
| 9950 | M | M.EcosS2ORF3675P (100% identity) | M.EcoS0750ORF9950P | |
| 9955 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20455 | glycosyltransferase | |||
| 20460 | R | EcosS3McrBP (100% identity) | EcoS0750McrBP | |
| 20465 | R | EcosS9McrCP (100% identity) | EcoS0750McrCP | |
| 20470 | Alw26I/Eco31I/Esp3I family type II restriction | |||