Escherichia coli AVS0225 |
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Putative Escherichia coli AVS0225 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 4,895,052 bp | CP124492 |
| plasmid pAVS0225-A: | 111,743 bp | CP124493 |
| plasmid pAVS0225-B: | 63,429 bp | CP124494 |
REBASE acronym: EcoS0225
Org_num: 67282
All begin QJA99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18320 | type IV toxin-antitoxin system AbiEi family | |||
| 18325 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0225ORF18330P |
| 18330 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0225ORF18330P |
| 18335 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0225ORF18330P |
| 18340 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0225DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0225ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 9565 | phosphohydrolase | |||
| 9570 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0225DcmP |
| 9575 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0225DcmP |
| 9580 | drug/metabolite exporter YedA | |||
| 20250 | McrC family protein | |||
| 20255 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0225ORF20260P |
| 20260 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0225ORF20260P |
| 20265 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0225ORF20260P |
| 20270 | helix-turn-helix domain-containing protein | |||
| 20550 | response regulator receiver domain | |||
| 20555 | R | Ecos19ORF20635P (100% identity) | EcoS0225ORF20555P | |
| 20560 | 97 aa hypothetical protein | |||
| plasmid pAVS0225-A | ||||
| 24335 | 76 aa hypothetical protein | |||
| 24340 | M | M.EcoR811ORFCP (100% identity) | GATC | M.EcoS0225ORF24340P |
| 24345 | 269 aa hypothetical protein | |||
| plasmid pAVS0225-B | ||||
| 24595 | 103 aa hypothetical protein | |||
| 24600 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0225ORF24600P |
| 24605 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20240 | glycosyltransferase | |||
| 20245 | R | EcosS3McrBP (100% identity) | EcoS0225McrBP | |
| 20250 | R | EcosS9McrCP (100% identity) | EcoS0225McrCP | |
| 20255 | Alw26I/Eco31I/Esp3I family type II restriction | |||