Escherichia coli AVS0456 |
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Putative Escherichia coli AVS0456 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 4,830,942 bp | CP124490 |
| plasmid pAVS0456-A: | 143,034 bp | CP124491 |
REBASE acronym: EcoS0456
Org_num: 67292
All begin QJP91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17860 | type IV toxin-antitoxin system AbiEi family | |||
| 17865 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0456ORF17870P |
| 17870 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0456ORF17870P |
| 17875 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0456ORF17870P |
| 17880 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | cell division protein DamX | |||
| 1700 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0456DamP |
| 1705 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0456ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 9450 | phosphohydrolase | |||
| 9455 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0456DcmP |
| 9460 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0456DcmP |
| 9465 | drug/metabolite exporter YedA | |||
| 19800 | McrC family protein | |||
| 19805 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0456ORF19810P |
| 19810 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0456ORF19810P |
| 19815 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0456ORF19810P |
| 19820 | helix-turn-helix domain-containing protein | |||
| 20100 | response regulator receiver domain | |||
| 20105 | R | Ecos19ORF20635P (100% identity) | EcoS0456ORF20105P | |
| 20110 | 97 aa hypothetical protein | |||
| plasmid pAVS0456-A | ||||
| 24080 | 73 aa hypothetical protein | |||
| 24085 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0456ORF24085P |
| 24090 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19790 | glycosyltransferase | |||
| 19795 | R | EcosS3McrBP (100% identity) | EcoS0456McrBP | |
| 19800 | R | EcosS9McrCP (99% identity) | EcoS0456McrCP | |
| 19805 | Alw26I/Eco31I/Esp3I family type II restriction | |||