Escherichia coli AVS0575 |
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Putative Escherichia coli AVS0575 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 4,909,649 bp | CP124483 |
| plasmid pAVS0575-A: | 137,093 bp | CP124484 |
| plasmid pAVS0575-B: | 110,848 bp | CP124485 |
REBASE acronym: EcoS0575
Org_num: 67302
All begin QJP96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18270 | type IV toxin-antitoxin system AbiEi family | |||
| 18275 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0575ORF18280P |
| 18280 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0575ORF18280P |
| 18285 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0575ORF18280P |
| 18290 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1975 | cell division protein DamX | |||
| 1980 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0575DamP |
| 1985 | ribulose-phosphate 3-epimerase | |||
| 2575 | DUF2556 family protein | |||
| 2580 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0575ORF2580P |
| 2585 | DNA-binding transcriptional regulator Fis | |||
| 9795 | phosphohydrolase | |||
| 9800 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0575DcmP |
| 9805 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0575DcmP |
| 9810 | drug/metabolite exporter YedA | |||
| 20200 | McrC family protein | |||
| 20205 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0575ORF20210P |
| 20210 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0575ORF20210P |
| 20215 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0575ORF20210P |
| 20220 | helix-turn-helix domain-containing protein | |||
| 20485 | 174 aa hypothetical protein | |||
| 20490 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoS0575ORF20490P |
| 20495 | R | EcoS0973ORF20950P (99% identity) | RCCGGY | EcoS0575ORF20490P |
| 20500 | response regulator receiver domain | |||
| 20500 | response regulator receiver domain | |||
| 20505 | R | Ecos19ORF20635P (100% identity) | EcoS0575ORF20505P | |
| 20510 | 97 aa hypothetical protein | |||
| plasmid pAVS0575-A | ||||
| 24475 | 73 aa hypothetical protein | |||
| 24480 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0575ORF24480P |
| 24485 | 103 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pAVS0575-B | ||||
| 25155 | 76 aa hypothetical protein | |||
| 25160 | M | M.Ecoppa6ORF24465P (100% identity) | GATC | M.EcoS0575ORF25160P |
| 25165 | 269 aa hypothetical protein | |||