Escherichia coli AVS0530 |
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Putative Escherichia coli AVS0530 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,090,382 bp | CP124345 |
| plasmid pAVS0530-A: | 146,626 bp | CP124346 |
REBASE acronym: EcoS0530
Org_num: 67297
All begin QJP77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18675 | type IV toxin-antitoxin system AbiEi family | |||
| 18680 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0530ORF18685P |
| 18685 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0530ORF18685P |
| 18690 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0530ORF18685P |
| 18695 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0530DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0530ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 10260 | phosphohydrolase | |||
| 10265 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0530DcmP |
| 10270 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0530DcmP |
| 10275 | drug/metabolite exporter YedA | |||
| 14450 | DUF3927 family protein | |||
| 14465 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoS0530ORF14465P |
| 14470 | TrmB family transcriptional regulator | |||
| 20605 | McrC family protein | |||
| 20610 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0530ORF20615P |
| 20615 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0530ORF20615P |
| 20620 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0530ORF20615P |
| 20625 | helix-turn-helix domain-containing protein | |||
| 20890 | 174 aa hypothetical protein | |||
| 20895 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoS0530ORF20895P |
| 20900 | ATP-binding protein | |||
| 20905 | response regulator receiver domain | |||
| 20910 | R | Ecos19ORF20635P (100% identity) | EcoS0530ORF20910P | |
| 20915 | 97 aa hypothetical protein | |||
| plasmid pAVS0530-A | ||||
| 25450 | 73 aa hypothetical protein | |||
| 25455 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0530ORF25455P |
| 25460 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10060 | shufflon system plasmid conjugative transfer | |||
| 10065 | R | Ecost88ORF24685P (100% identity) | EcoS0530ORF10070P | |
| 10070 | M | M.EcosS2ORF3675P (100% identity) | M.EcoS0530ORF10070P | |
| 10075 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20595 | glycosyltransferase | |||
| 20600 | R | EcosS3McrBP (100% identity) | EcoS0530McrBP | |
| 20605 | R | EcosS9McrCP (100% identity) | EcoS0530McrCP | |
| 20610 | Alw26I/Eco31I/Esp3I family type II restriction | |||