Escherichia coli AVS0710 |
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Putative Escherichia coli AVS0710 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,060,072 bp | CP124341 |
| plasmid pAVS0710-A: | 146,752 bp | CP124342 |
REBASE acronym: EcoS0710
Org_num: 67306
All begin QJB06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18540 | type IV toxin-antitoxin system AbiEi family | |||
| 18545 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0710ORF18550P |
| 18550 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0710ORF18550P |
| 18555 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0710ORF18550P |
| 18560 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0710DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0710ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 10130 | phosphohydrolase | |||
| 10135 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0710DcmP |
| 10140 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0710DcmP |
| 10145 | drug/metabolite exporter YedA | |||
| 14320 | DUF3927 family protein | |||
| 14335 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoS0710ORF14335P |
| 14340 | TrmB family transcriptional regulator | |||
| 20450 | McrC family protein | |||
| 20455 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0710ORF20460P |
| 20460 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0710ORF20460P |
| 20465 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0710ORF20460P |
| 20470 | helix-turn-helix domain-containing protein | |||
| 20735 | 174 aa hypothetical protein | |||
| 20740 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoS0710ORF20740P |
| 20745 | ATP-binding protein | |||
| 20750 | response regulator receiver domain | |||
| 20755 | R | Ecos19ORF20635P (100% identity) | EcoS0710ORF20755P | |
| 20760 | 97 aa hypothetical protein | |||
| plasmid pAVS0710-A | ||||
| 25295 | 73 aa hypothetical protein | |||
| 25300 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0710ORF25300P |
| 25305 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9930 | shufflon system plasmid conjugative transfer | |||
| 9935 | R | Ecost88ORF24685P (100% identity) | EcoS0710ORF9940P | |
| 9940 | M | M.EcosS2ORF3675P (100% identity) | M.EcoS0710ORF9940P | |
| 9945 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20440 | glycosyltransferase | |||
| 20445 | R | EcosS3McrBP (100% identity) | EcoS0710McrBP | |
| 20450 | R | EcosS9McrCP (100% identity) | EcoS0710McrCP | |
| 20455 | Alw26I/Eco31I/Esp3I family type II restriction | |||