Escherichia coli AVS0971 |
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Putative Escherichia coli AVS0971 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,072,410 bp | CP124337 |
| plasmid pAVS0971-A: | 138,200 bp | CP124338 |
REBASE acronym: EcoS0971
Org_num: 67325
All begin QJP90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18565 | type IV toxin-antitoxin system AbiEi family | |||
| 18570 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0971ORF18575P |
| 18575 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0971ORF18575P |
| 18580 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0971ORF18575P |
| 18585 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0971DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0971ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 10150 | phosphohydrolase | |||
| 10155 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0971DcmP |
| 10160 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0971DcmP |
| 10165 | drug/metabolite exporter YedA | |||
| 14345 | DUF3927 family protein | |||
| 14360 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoS0971ORF14360P |
| 14365 | TrmB family transcriptional regulator | |||
| 20495 | McrC family protein | |||
| 20500 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0971ORF20505P |
| 20505 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0971ORF20505P |
| 20510 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0971ORF20505P |
| 20515 | helix-turn-helix domain-containing protein | |||
| 20780 | 174 aa hypothetical protein | |||
| 20785 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoS0971ORF20785P |
| 20790 | ATP-binding protein | |||
| 20795 | response regulator receiver domain | |||
| 20800 | R | Ecos19ORF20635P (100% identity) | EcoS0971ORF20800P | |
| 20805 | 97 aa hypothetical protein | |||
| plasmid pAVS0971-A | ||||
| 25290 | 73 aa hypothetical protein | |||
| 25295 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0971ORF25295P |
| 25300 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9940 | shufflon system plasmid conjugative transfer | |||
| 9945 | R | Ecost88ORF24685P (100% identity) | EcoS0971ORF9950P | |
| 9950 | M | M.EcosS2ORF3675P (100% identity) | M.EcoS0971ORF9950P | |
| 9955 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20485 | glycosyltransferase | |||
| 20490 | R | EcosS3McrBP (100% identity) | EcoS0971McrBP | |
| 20495 | R | EcosS9McrCP (100% identity) | EcoS0971McrCP | |
| 20500 | Alw26I/Eco31I/Esp3I family type II restriction | |||