Escherichia coli AVS0787 |
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Putative Escherichia coli AVS0787 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,285,418 bp | CP124328 |
| plasmid pAVS0787-A: | 149,581 bp | CP124329 |
| plasmid pAVS0787-B: | 61,165 bp | CP124330 |
REBASE acronym: EcoS0787
Org_num: 67316
All begin QJP62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9880 | type IV toxin-antitoxin system AbiEi family | |||
| 9885 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0787ORF9890P |
| 9890 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0787ORF9890P |
| 9895 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0787ORF9890P |
| 9900 | ash family protein | |||
| 11695 | restriction endonuclease | |||
| 11700 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS0787ORF11700P |
| 11705 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS0787ORF11700P |
| 11710 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS0787ORF11700P |
| 11715 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3810 | drug/metabolite exporter YedA | |||
| 3815 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0787DcmP |
| 3820 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0787DcmP |
| 3825 | phosphohydrolase | |||
| 6400 | helix-turn-helix transcriptional regulator | |||
| 6405 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS0787ORF6405P | |
| 6410 | 71 aa hypothetical protein | |||
| 12045 | McrC family protein | |||
| 12050 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0787ORF12055P |
| 12055 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0787ORF12055P |
| 12060 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0787ORF12055P |
| 12065 | helix-turn-helix domain-containing protein | |||
| 13340 | response regulator receiver domain | |||
| 13345 | R | EcosS3ORF15775P (100% identity) | EcoS0787ORF13350P | |
| 13350 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS0787ORF13350P | |
| 13355 | conjugal transfer protein TraG N-terminal | |||
| 17795 | cell division protein DamX | |||
| 17800 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0787DamP |
| 17805 | ribulose-phosphate 3-epimerase | |||
| 18395 | DUF2556 family protein | |||
| 18400 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0787ORF18400P |
| 18405 | DNA-binding transcriptional regulator Fis | |||
| 22175 | PerC family transcriptional regulator | |||
| 22180 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoS0787ORF22180P |
| 22185 | LexA family transcriptional regulator | |||
| 22220 | 95 aa hypothetical protein | |||
| 22225 | M | M.EcosR6ORF7985P (100% identity) | M.EcoS0787ORF22225P | |
| 22230 | phage lysis protein EssD | |||
| 22355 | 257 aa hypothetical protein | |||
| 22360 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.EcoS0787ORF22360P |
| 22365 | R | Sso8033ORF3755P (99% identity) | CCWGG | EcoS0787ORF22360P |
| 22370 | 121 aa hypothetical protein | |||
| 26060 | TrmB family transcriptional regulator | |||
| 26065 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoS0787ORF26065P |
| 26080 | DUF3927 family protein | |||
| plasmid pAVS0787-A | ||||
| 26940 | 73 aa hypothetical protein | |||
| 26945 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoS0787ORF26945P | |
| 26950 | 103 aa hypothetical protein | |||
| plasmid pAVS0787-B | ||||
| 27090 | 103 aa hypothetical protein | |||
| 27095 | M | M.Sfl2142ORF380P (99% identity) | M.EcoS0787ORF27095P | |
| 27100 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11690 | BrnT family toxin | |||
| 11695 | R | Ecou021MrrP (100% identity) | EcoS0787MrrP | |
| 11700 | class I SAM-dependent DNA methyltransferase | |||
| 12035 | glycosyltransferase | |||
| 12040 | R | EcosS3McrBP (100% identity) | EcoS0787McrBP | |
| 12045 | R | EcosS9McrCP (100% identity) | EcoS0787McrCP | |
| 12050 | Alw26I/Eco31I/Esp3I family type II restriction | |||