Escherichia coli AVS0536 |
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Putative Escherichia coli AVS0536 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,089,992 bp | CP124324 |
| plasmid pAVS0536-A: | 146,647 bp | CP124325 |
REBASE acronym: EcoS0536
Org_num: 67299
All begin QJP54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18670 | type IV toxin-antitoxin system AbiEi family | |||
| 18675 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0536ORF18680P |
| 18680 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0536ORF18680P |
| 18685 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0536ORF18680P |
| 18690 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0536DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0536ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 10260 | phosphohydrolase | |||
| 10265 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0536DcmP |
| 10270 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0536DcmP |
| 10275 | drug/metabolite exporter YedA | |||
| 14450 | DUF3927 family protein | |||
| 14465 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoS0536ORF14465P |
| 14470 | TrmB family transcriptional regulator | |||
| 20600 | McrC family protein | |||
| 20605 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0536ORF20610P |
| 20610 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0536ORF20610P |
| 20615 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0536ORF20610P |
| 20620 | helix-turn-helix domain-containing protein | |||
| 20885 | 174 aa hypothetical protein | |||
| 20890 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoS0536ORF20890P |
| 20895 | ATP-binding protein | |||
| 20900 | response regulator receiver domain | |||
| 20905 | R | Ecos19ORF20635P (100% identity) | EcoS0536ORF20905P | |
| 20910 | 97 aa hypothetical protein | |||
| 21880 | response regulator receiver domain | |||
| 21885 | R | EcosS3ORF15775P (100% identity) | EcoS0536ORF21890P | |
| 21890 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS0536ORF21890P | |
| 21895 | conjugal transfer protein TraG N-terminal | |||
| plasmid pAVS0536-A | ||||
| 25445 | 73 aa hypothetical protein | |||
| 25450 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0536ORF25450P |
| 25455 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10060 | shufflon system plasmid conjugative transfer | |||
| 10065 | R | Ecost88ORF24685P (100% identity) | EcoS0536ORF10070P | |
| 10070 | M | M.EcosS2ORF3675P (100% identity) | M.EcoS0536ORF10070P | |
| 10075 | SpnT protein | |||