Escherichia coli AVS0465 |
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Putative Escherichia coli AVS0465 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,174,834 bp | CP124367 |
| plasmid pAVS0465-A: | 103,076 bp | CP124368 |
REBASE acronym: EcoS0465
Org_num: 67293
All begin QJP75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17745 | endoribonuclease SymE | |||
| 17750 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS0465ORF17760P |
| 17755 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS0465ORF17760P |
| 17760 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS0465ORF17760P |
| 17765 | restriction endonuclease | |||
| 19570 | ash family protein | |||
| 19575 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0465ORF19580P |
| 19580 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0465ORF19580P |
| 19585 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0465ORF19580P |
| 19590 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3490 | drug/metabolite exporter YedA | |||
| 3495 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0465DcmP |
| 3500 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0465DcmP |
| 3505 | phosphohydrolase | |||
| 10965 | DNA-binding transcriptional regulator Fis | |||
| 10970 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0465ORF10970P |
| 10975 | DUF2556 family protein | |||
| 11565 | ribulose-phosphate 3-epimerase | |||
| 11570 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0465DamP |
| 11575 | cell division protein DamX | |||
| 13085 | BREX system P-loop protein BrxC | |||
| 13090 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoS0465ORF13090P |
| 13095 | BREX-1 system phosphatase PglZ type A | |||
| 17395 | helix-turn-helix domain-containing protein | |||
| 17400 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0465ORF17400P |
| 17405 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0465ORF17400P |
| 17410 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0465ORF17400P |
| 17415 | McrC family protein | |||
| 23070 | 72 aa hypothetical protein | |||
| 23075 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS0465ORF23075P | |
| 23080 | helix-turn-helix transcriptional regulator | |||
| plasmid pAVS0465-A | ||||
| 25785 | 73 aa hypothetical protein | |||
| 25790 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS0465ORF25790P |
| 25795 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17410 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 17415 | R | EcosS9McrCP (100% identity) | EcoS0465McrCP | |
| 17420 | R | EcosS3McrBP (100% identity) | EcoS0465McrBP | |
| 17425 | glycosyltransferase | |||
| 17760 | class I SAM-dependent DNA methyltransferase | |||
| 17765 | R | Ecou021MrrP (100% identity) | EcoS0465MrrP | |
| 17770 | BrnT family toxin | |||