Escherichia coli AVS0343 |
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Putative Escherichia coli AVS0343 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,036,755 bp | CP124517 |
| plasmid pAVS0343-A: | 125,500 bp | CP124518 |
REBASE acronym: EcoS0343
Org_num: 67288
All begin QJB09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19650 | endoribonuclease SymE | |||
| 19655 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS0343ORF19665P |
| 19660 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS0343ORF19665P |
| 19665 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS0343ORF19665P |
| 19670 | restriction endonuclease | |||
| plasmid pAVS0343-A | ||||
| 25175 | IS1-like element IS1A family transposase | |||
| 25180 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoS0343ORF25190P |
| 25185 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S1.EcoS0343ORF25190P |
| 25190 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoS0343ORF25190P |
| 25195 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 370 | 71 aa hypothetical protein | |||
| 375 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS0343ORF375P | |
| 380 | helix-turn-helix transcriptional regulator | |||
| 2635 | TrmB family transcriptional regulator | |||
| 2640 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoS0343ORF2640P |
| 2655 | DUF3927 family protein | |||
| 6225 | drug/metabolite exporter YedA | |||
| 6230 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0343DcmP |
| 6235 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0343DcmP |
| 6240 | phosphohydrolase | |||
| 13490 | DNA-binding transcriptional regulator Fis | |||
| 13495 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0343ORF13495P |
| 13500 | DUF2556 family protein | |||
| 14100 | ribulose-phosphate 3-epimerase | |||
| 14105 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0343DamP |
| 14110 | cell division protein DamX | |||
| 19295 | helix-turn-helix domain-containing protein | |||
| 19300 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0343ORF19300P |
| 19305 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0343ORF19300P |
| 19310 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0343ORF19300P |
| 19315 | McrC family protein | |||
| plasmid pAVS0343-A | ||||
| 25115 | 73 aa hypothetical protein | |||
| 25120 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS0343ORF25120P |
| 25125 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19310 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 19315 | R | EcosS9McrCP (100% identity) | EcoS0343McrCP | |
| 19320 | R | EcosS3McrBP (100% identity) | EcoS0343McrBP | |
| 19325 | glycosyltransferase | |||
| 19665 | class I SAM-dependent DNA methyltransferase | |||
| 19670 | R | Ecou021MrrP (100% identity) | EcoS0343MrrP | |
| 19675 | BrnT family toxin | |||