Lachnospiraceae bacterium 9CFEGH4 |
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Putative Lachnospiraceae bacterium 9CFEGH4 RM systems
Ref: Hisatomi,A. et al. unpublished
REBASE ref # 36795
Complete sequence: 3,312,300 bp
GenBank #: AP027744
REBASE acronym: Lba4
Org_num: 67475
All begin Lac2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16640 | MATE family efflux transporter | |||
| 16650 | S | S.Bpu197ORF8830P (32% identity) | S3.Lba4ORF16680P | |
| 16660 | site-specific integrase | |||
| 16670 | S | S1.Esp3007ORFDP (60% identity) | S1.Lba4ORF16680P | |
| 16680 | M | M.Lba14ORF26640P (98% identity) | M.Lba4ORF16680P | |
| 16690 | cell filamentation protein | |||
| 16700 | S | S1.PmeBin173ORFAP (45% identity) | S2.Lba4ORF16680P | |
| 16710 | R | Lba14ORF26640P (98% identity) | Lba4ORF16680P | |
| 16720 | S | S2.PmeBin336ORFCP (53% identity) | S4.Lba4ORF16680P | |
| 16730 | purine nucleoside phosphorylase | |||
| 27350 | cell division protein Fic | |||
| 27360 | M | M.Lba12ORF8300P (99% identity) | M.Lba4ORF27360P | |
| 27370 | 263 aa hypothetical protein | |||
| 27380 | S | S2.LbaNSJ4ORF2665P (41% identity) | S.Lba4ORF27360P | |
| 27390 | 76 aa hypothetical protein | |||
| 27400 | R | Lba12ORF8300P (98% identity) | Lba4ORF27360P | |
| 27410 | 358 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13960 | 153 aa hypothetical protein | |||
| 13970 | RM | PmeBin490ORFBP (79% identity) | Lba4ORF13970P | |
| 13980 | 114 aa hypothetical protein | |||
| 17290 | 949 aa hypothetical protein | |||
| 17300 | RM | EbaCHKC4ORF1951P (99% identity) | Lba4ORF17310P | |
| 17310 | M | M.EbaCHKC4ORF1951P (99% identity) | M.Lba4ORF17310P | |
| 17320 | 771 aa hypothetical protein | |||
| 19380 | 398 aa hypothetical protein | |||
| 19390 | R | R2.PfrMB139ORFCP (86% identity) | R1.Lba4ORF19420P | |
| 19400 | R | R1.PfrMB139ORFCP (44% identity) | R2.Lba4ORF19420P | |
| 19410 | M | M1.EhaX29ORF6420P (77% identity) | M1.Lba4ORF19420P | |
| 19420 | M | M2.EhaX29ORF6420P (69% identity) | M2.Lba4ORF19420P | |
| 19430 | 68 aa hypothetical protein | |||
| 27890 | 246 aa hypothetical protein | |||
| 27900 | M | M.Lba14ORF7060P (98% identity) | M.Lba4ORF27900P | |
| 27910 | RM | Lba14ORF7060P (99% identity) | Lba4ORF27900P | |
| 27920 | 397 aa hypothetical protein | |||
| 30750 | 287 aa hypothetical protein | |||
| 30760 | M | M.RbrL2ORF920P (100% identity) | GATC | M.Lba4ORF30760P |
| 30770 | transposase | |||
| 30780 | hydrolase | |||
| 30790 | M | M.RbrL2ORF950P (100% identity) | CCSSGG | M.Lba4ORF30790P |
| 30800 | conjugal transfer protein | |||
| 31820 | 299 aa hypothetical protein | |||
| 31830 | RM | FnuSB9ORF1185P (72% identity) | Lba4ORF31830P | |
| 31840 | 742 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25080 | ABC transporter ATP-binding protein | |||
| 25090 | M | M.Lba14ORF3420P (100% identity) | M.Lba4ORF25090P | |
| 25100 | 327 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17270 | 342 aa hypothetical protein | |||
| 17280 | R | PmeBin475McrCP (95% identity) | Lba4McrCP | |
| 17290 | R | PmeBin475McrBP (99% identity) | Lba4McrBP | |
| 17300 | 788 aa hypothetical protein | |||