Lachnospiraceae bacterium 12BBH14 |
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Putative Lachnospiraceae bacterium 12BBH14 RM systems
Ref: Hisatomi,A. et al. unpublished
REBASE ref # 36795
Complete sequence: 3,111,590 bp
GenBank #: AP027742
REBASE acronym: Lba14
Org_num: 67474
All begin Lac1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26600 | MATE family efflux transporter | |||
| 26610 | S | S1.DspTolMORF10280P (31% identity) | S3.Lba14ORF26640P | |
| 26620 | site-specific integrase | |||
| ??? | S | S1.Lba14ORF26640P (42% identity) | S2.Lba14ORF26640P | |
| 26640 | M | M.Lba4ORF16680P (98% identity) | M.Lba14ORF26640P | |
| 26650 | cell filamentation protein | |||
| 26660 | S | S2.PmeBin418ORFCP (45% identity) | S1.Lba14ORF26640P | |
| 26670 | R | Lba4ORF16680P (98% identity) | Lba14ORF26640P | |
| 26680 | type I restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4300 | 287 aa hypothetical protein | |||
| 4310 | M | M.RbrL2ORF920P (100% identity) | GATC | M.Lba14ORF4310P |
| 4320 | transposase | |||
| 4330 | hydrolase | |||
| 4340 | M | M.RbrL2ORF950P (100% identity) | CCSSGG | M.Lba14ORF4340P |
| 4350 | conjugal transfer protein | |||
| 7050 | 246 aa hypothetical protein | |||
| 7060 | M | M.Lba12ORF7820P (100% identity) | M.Lba14ORF7060P | |
| 7070 | RM | Espc25ORF9400P (99% identity) | Lba14ORF7060P | |
| 7080 | 397 aa hypothetical protein | |||
| 10540 | ATP-dependent helicase | |||
| 10550 | RM | Ccf10ORF8060P (45% identity) | Lba14ORF10550P | |
| 10560 | 102 aa hypothetical protein | |||
| 24260 | 65 aa hypothetical protein | |||
| 24270 | R | RspKB18ORF20120P (88% identity) | Lba14ORF24280P | |
| 24280 | M | M.Lba11650ORF3020P (83% identity) | M.Lba14ORF24280P | |
| 24290 | 258 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24190 | 1213 aa hypothetical protein | |||
| 24200 | R | Msp3756ORFCP (91% identity) | Lba14ORF24220P | |
| 24210 | 104 aa hypothetical protein | |||
| 24220 | M | M.PbaAS15ORF1674P (29% identity) | M.Lba14ORF24220P | |
| 24230 | 226 aa hypothetical protein | |||