Escherichia coli P4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli P4 RM systems
Ref: Ramachandra,D.C. et al. unpublished
REBASE ref # 36778
Complete sequence: 5,099,806 bp
GenBank #: CP072688
REBASE acronym: EcoP4b
Org_num: 67417
All begin J8I92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20560 | restriction endonuclease | |||
| 20565 | M | M.EcoS165ORF17585P (100% identity) | GGYANNNNNGTNG | M.EcoP4bORF20565P |
| 20570 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.EcoP4bORF20565P |
| 20575 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | EcoP4bORF20565P |
| 20580 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1810 | cell division protein DamX | |||
| 1815 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoP4bDamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2410 | DUF2556 family protein | |||
| 2415 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.EcoP4bORF2415P |
| 2420 | DNA-binding transcriptional regulator Fis | |||
| 6820 | DUF1382 family protein | |||
| 6825 | M | M.EcosC25ORF8435P (100% identity) | M.EcoP4bORF6825P | |
| 6830 | PerC family transcriptional regulator | |||
| 10070 | phosphohydrolase | |||
| 10075 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoP4bDcmP |
| 10080 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoP4bDcmP |
| 10085 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20555 | BrnT family toxin | |||
| 20560 | R | Ecost88MrrP (100% identity) | EcoP4bMrrP | |
| 20565 | type I restriction-modification system subunit | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14260 | NinE family protein | |||
| 14265 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoP4bORF14265P |
| 14270 | recombination protein NinB | |||