Phytobacter diazotrophicus TA9759 |
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Putative Phytobacter diazotrophicus TA9759 RM systems
Ref: Kubota,H. et al. unpublished
REBASE ref # 33665
| Sequence length: | GenBank #: | |
| Chromosome: | 5,709,306 bp | AP028047 |
| plasmid pTMTA97591: | 174,343 bp | AP028048 |
| plasmid pTMTA97592: | 173,698 bp | AP028049 |
REBASE acronym: Pdi9759
Org_num: 67060
All begin PDTA9759_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4080 | cell division protein DamX | |||
| 4090 | M | M.PspSCO41DamP (100% identity) | GATC | M.Pdi9759DamP |
| 4100 | ribulose-phosphate 3-epimerase | |||
| 11290 | LysR family transcriptional regulator | |||
| 11300 | M | M.PspSCO41ORFAP (100% identity) | CCWGG | M.Pdi9759ORF11300P |
| 11310 | 213 aa hypothetical protein | |||
| 11440 | TraR/DksA family transcriptional regulator | |||
| 11450 | M | M.Pdi9832ORF11440P (100% identity) | M.Pdi9759ORF11450P | |
| 11460 | replication endonuclease | |||
| 18450 | 86 aa hypothetical protein | |||
| 18460 | M | M.Pdi9832ORF18430P (100% identity) | M.Pdi9759ORF18460P | |
| 18470 | S49 family peptidase | |||
| 33270 | 55 aa hypothetical protein | |||
| 33280 | M | M.Pdi9832ORF32950P (100% identity) | M.Pdi9759ORF33280P | |
| 33290 | 86 aa hypothetical protein | |||
| 33290 | 86 aa hypothetical protein | |||
| 33300 | M | M.Pdi9832ORF32970P (100% identity) | M.Pdi9759ORF33300P | |
| 33310 | 162 aa hypothetical protein | |||
| 47320 | TonB-dependent siderophore receptor | |||
| 47330 | RM | Pdi9832ORF47000P (100% identity) | Pdi9759ORF47340P | |
| 47340 | M | M.Pdi9832ORF47000P (100% identity) | M.Pdi9759ORF47340P | |
| 47350 | 31 aa hypothetical protein | |||
| plasmid pTMTA97591 | ||||
| 55690 | 100 aa hypothetical protein | |||
| 55700 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Pdi9759ORF55700P |
| 55710 | 143 aa hypothetical protein | |||
| plasmid pTMTA97592 | ||||
| 56960 | IS110 family transposase | |||
| 56970 | R | Pdi9832ORF54580P (100% identity) | Pdi9759ORF56980P | |
| 56980 | M | M.Pdi9832ORF54580P (100% identity) | M.Pdi9759ORF56980P | |
| 56990 | DNA methylase | |||
| 56980 | DNA cytosine methyltransferase | |||
| 56990 | M | M.Pdi9832ORF54590P (100% identity) | M.Pdi9759ORF56990P | |
| 57000 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 40360 | diguanylate cyclase | |||
| 40370 | R | Pdi9832McrBP (100% identity) | Pdi9759McrBP | |
| 40380 | R | Pdi9832McrCP (100% identity) | Pdi9759McrCP | |
| 40390 | MFS transporter | |||