Escherichia coli 5132 |
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Putative Escherichia coli 5132 RM systems
Ref: Shropshire,W.C. et al. unpublished
REBASE ref # 36584
| Sequence length: | GenBank #: | |
| Chromosome: | 4,989,393 bp | CP123231 |
| plasmid pMB11100_1: | 91,437 bp | CP123232 |
REBASE acronym: Eco5132
Org_num: 66679
All begin QET41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 385 | 184 aa hypothetical protein | |||
| 390 | R | Ecos53ORF20340P (99% identity) | ACYNNNNNNGTTC | Eco5132ORF400P |
| 395 | S | S.Ecos53ORF20340P (99% identity) | ACYNNNNNNGTTC | S.Eco5132ORF400P |
| 400 | M | M.SenS0935ORF770P (100% identity) | ACYNNNNNNGTTC | M.Eco5132ORF400P |
| 405 | type II toxin-antitoxin system RelB/DinJ family | |||
| 20090 | 322 aa hypothetical protein | |||
| 20095 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | Eco5132ORF20100P |
| 20100 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.Eco5132ORF20100P |
| 20105 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.Eco5132ORF20100P |
| 20110 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1935 | cell division protein DamX | |||
| 1940 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco5132DamP |
| 1945 | ribulose-phosphate 3-epimerase | |||
| 2535 | DUF2556 family protein | |||
| 2540 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.Eco5132ORF2540P |
| 2545 | DNA-binding transcriptional regulator Fis | |||
| 9550 | phosphohydrolase | |||
| 9555 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco5132DcmP |
| 9560 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco5132DcmP |
| 9565 | drug/metabolite exporter YedA | |||
| 12970 | tellurite resistance protein | |||
| 12990 | M | M.SflC32ORFBP (100% identity) | M.Eco5132ORF12990P | |
| 12995 | TrmB family transcriptional regulator | |||
| plasmid pMB11100_1 | ||||
| 24420 | 103 aa hypothetical protein | |||
| 24425 | M | M.SflN101ORF24625P (100% identity) | M.Eco5132ORF24425P | |
| 24430 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20110 | endoribonuclease SymE | |||
| 20115 | R | Eho218GmrDP (53% identity) | Eco5132GmrDBP | |
| 20120 | R | Eho218GmrDP (40% identity) | Eco5132GmrDAP | |
| 20125 | Rpn family recombination-promoting | |||