Escherichia coli VE-V10-F |
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Putative Escherichia coli VE-V10-F RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 36547
| Sequence length: | GenBank #: | |
| Chromosome: | 4,888,970 bp | AP027971 |
| plasmid pVE-V10-F_1: | 169,195 bp | AP027972 |
| plasmid pVE-V10-F_2: | 58,314 bp | AP027973 |
REBASE acronym: EcoVEV10F
Org_num: 66556
All begin VEV10F_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11360 | 125 aa hypothetical protein | |||
| 11370 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoVEV10FORF11390P |
| 11380 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoVEV10FORF11390P |
| 11390 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoVEV10FORF11390P |
| 11400 | chromosome partitioning protein ParB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3270 | cell division protein DamX | |||
| 3280 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoVEV10FDamP |
| 3290 | ribulose-phosphate 3-epimerase | |||
| 4440 | acrEF/envCD operon repressor | |||
| 4450 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoVEV10FORF4450P |
| 4460 | DNA-binding protein Fis | |||
| 15710 | 74 aa hypothetical protein | |||
| ??? | M | M.EcoNC22ORF2160P (100% identity) | M.EcoVEV10FORF15720P | |
| 15730 | 89 aa hypothetical protein | |||
| 18310 | phosphohydrolase | |||
| 18320 | M | M.EcoVEV11MDcmP (100% identity) | CCWGG | M.EcoVEV10FDcmP |
| 18330 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoVEV10FDcmP |
| 18340 | amino acid exporter for phenylalanine, | |||
| 29680 | replication endonuclease from | |||
| 29690 | M | M.KpnK41ORF17960P (84% identity) | M.EcoVEV10FORF29690P | |
| 29700 | IS2 repressor TnpA | |||
| 33090 | 63 aa hypothetical protein | |||
| 33100 | M | M.EcosE1ORFAP (100% identity) | M.EcoVEV10FORF33100P | |
| 33110 | 64 aa hypothetical protein | |||
| 35810 | 92 aa hypothetical protein | |||
| 35820 | M | M.Ecos32ORF15460P (100% identity) | GCCGGC | M.EcoVEV10FORF35820P |
| 35830 | R | Ecos32ORF15460P (100% identity) | GCCGGC | EcoVEV10FORF35820P |
| 35840 | gamma-glutamyl phosphate reductase | |||
| plasmid pVE-V10-F_1 | ||||
| 47170 | 73 aa hypothetical protein | |||
| 47180 | M | M.SflN92ORF24820P (100% identity) | M.EcoVEV10FORF47180P | |
| 47190 | 145 aa hypothetical protein | |||
| plasmid pVE-V10-F_2 | ||||
| 47800 | plasmid stability protein StbA | |||
| 47810 | M | M.Xca80ORFEP (100% identity) | M.EcoVEV10FORF47810P | |
| 47820 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15830 | 129 aa hypothetical protein | |||
| 15840 | R | Ecochi7122GmrSDP (100% identity) | EcoVEV10FGmrSDP | |
| 15850 | 126 aa hypothetical protein | |||
| 39380 | 84 aa hypothetical protein | |||
| 39390 | R | EcosS3McrBP (100% identity) | EcoVEV10FMcrBP | |
| 39400 | R | EcosS9McrCP (100% identity) | EcoVEV10FMcrCP | |
| 39410 | 579 aa hypothetical protein | |||