Escherichia coli VE-T9 |
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Putative Escherichia coli VE-T9 RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 36547
| Sequence length: | GenBank #: | |
| Chromosome: | 4,573,484 bp | AP027963 |
| plasmid pVE-T9_2: | 86,870 bp | AP027965 |
| plasmid pVE-T9_4: | 4,286 bp | AP027967 |
REBASE acronym: EcoVET9
Org_num: 66555
All begin VET9_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25950 | 290 aa hypothetical protein | |||
| 25960 | M | M.SflN97ORF14060P (100% identity) | M.EcoVET9ORF25960P | |
| 25970 | S | S.SflN97ORF14060P (100% identity) | S.EcoVET9ORF25960P | |
| 25980 | R | EcoW1316ORF930P (99% identity) | EcoVET9ORF25960P | |
| 25990 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3340 | cell division protein DamX | |||
| ??? | M | M.EcoXJ52DamP (100% identity) | GATC | M.EcoVET9DamP |
| 3360 | ribulose-phosphate 3-epimerase | |||
| 4490 | acrEF/envCD operon transcriptional regulator | |||
| 4500 | M | M.Ssp28760ORF20045P (99% identity) | ATGCAT | M.EcoVET9ORF4500P |
| 4510 | DNA-binding protein Fis | |||
| 11260 | 64 aa hypothetical protein | |||
| 11270 | M | M.EfeC23ORF6940P (97% identity) | M.EcoVET9ORF11270P | |
| 11280 | transcriptional activator | |||
| 17030 | 231 aa hypothetical protein | |||
| 17040 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoVET9DcmP |
| 17050 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoVET9DcmP |
| 17060 | inner membrane transporter YedA | |||
| 33510 | LexA family transcriptional regulator | |||
| 33520 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoVET9ORF33520P |
| 33530 | 83 aa hypothetical protein | |||
| plasmid pVE-T9_2 | ||||
| 44390 | plasmid stability protein StbA | |||
| 44400 | M | M.SenST46ORF25580P (100% identity) | M.EcoVET9ORF44400P | |
| 44410 | 73 aa hypothetical protein | |||
| plasmid pVE-T9_4 | ||||
| 45320 | rop protein | |||
| 45330 | R | Efe33C07ORF24365P (100% identity) | EcoVET9ORF45340P | |
| 45340 | M | M.Efe33C07ORF24365P (100% identity) | M.EcoVET9ORF45340P | |