Escherichia coli VE-T2 |
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Putative Escherichia coli VE-T2 RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 36547
| Sequence length: | GenBank #: | |
| Chromosome: | 4,889,585 bp | AP027960 |
| plasmid pVE-T2_1: | 88,388 bp | AP027961 |
REBASE acronym: EcoVET2
Org_num: 66554
All begin VET2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38940 | 139 aa hypothetical protein | |||
| 38950 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoVET2ORF38960P |
| 38960 | M | M.SflTORF4636P (98% identity) | CCANNNNNNNNNTTGG | M.EcoVET2ORF38960P |
| 38970 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoVET2ORF38960P |
| 38980 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4210 | cell division protein DamX | |||
| 4220 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoVET2DamP |
| 4230 | ribulose-phosphate 3-epimerase | |||
| 5190 | acrEF/envCD operon transcriptional regulator | |||
| 5200 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoVET2ORF5200P |
| 5210 | DNA-binding protein Fis | |||
| 18070 | 322 aa hypothetical protein | |||
| ??? | M | M.EcoVET10ORFAP (100% identity) | M.EcoVET2ORFAP | |
| 18090 | protein ninF | |||
| 18930 | phosphohydrolase | |||
| 18940 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoVET2DcmP |
| 18950 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoVET2DcmP |
| 18960 | inner membrane transporter YedA | |||
| 32720 | 63 aa hypothetical protein | |||
| 32730 | M | M.EcoWW2ORF16975P (100% identity) | M.EcoVET2ORF32730P | |
| 32740 | 64 aa hypothetical protein | |||
| 39320 | 9-O-acetyl-N-acetylneuraminic acid | |||
| ??? | R | SflN101ORF11875P (100% identity) | EcoVET2ORF39330P | |
| 39350 | 691 aa hypothetical protein | |||
| plasmid pVE-T2_1 | ||||
| 46140 | 73 aa hypothetical protein | |||
| 46150 | M | M.SflN92ORF24820P (100% identity) | M.EcoVET2ORF46150P | |
| 46160 | 145 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38980 | endoribonuclease SymE | |||
| ??? | R | SflN101GmrSP (100% identity) | EcoVET2GmrSP | |
| 39010 | 49 aa hypothetical protein | |||
| 39340 | 187 aa hypothetical protein | |||
| 39350 | R | SflN101McrBP (100% identity) | EcoVET2McrBP | |
| 39360 | R | SflN101McrCP (100% identity) | EcoVET2McrCP | |
| 39370 | 164 aa hypothetical protein | |||