Ligilactobacillus salivarius P1CEA3 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Ligilactobacillus salivarius P1CEA3 RM systems
Ref: Sevillano,E. et al. unpublished
REBASE ref # 36588
| Sequence length: | GenBank #: | |
| Chromosome: | 1,739,667 bp | CP116812 |
| plasmid pMP1CEA3: | 194,140 bp | CP116813 |
REBASE acronym: LsaCEA3
Org_num: 66689
All begin POF44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4495 | PTS transporter subunit EIIC | |||
| 4500 | S | S4.Lsa210215ORF5130P (99% identity) | S3.LsaCEA3ORF4520P | |
| 4505 | S | S1.LsaAR612ORF4575P (100% identity) | S2.LsaCEA3ORF4520P | |
| 4510 | site-specific integrase | |||
| 4515 | S | S1.Lsa210215ORF5130P (59% identity) | S1.LsaCEA3ORF4520P | |
| 4520 | M | M.LsaCORF761P (100% identity) | M.LsaCEA3ORF4520P | |
| 4525 | R | LsaAR612ORF4575P (100% identity) | LsaCEA3ORF4520P | |
| 4530 | 47 aa hypothetical protein | |||
| 6550 | AbiH family protein | |||
| 6555 | S | S.LsaAR612ORF6635P (100% identity) | S.LsaCEA3ORF6560P | |
| 6560 | M | M.LsaAR612ORF6635P (100% identity) | M.LsaCEA3ORF6560P | |
| 6565 | R | LsaAR612ORF6635P (100% identity) | LsaCEA3ORF6560P | |
| 6570 | C | C.LsaAR612ORF6635P (100% identity) | C.LsaCEA3ORF6560P | |
| 6575 | AAA family ATPase | |||
| plasmid pMP1CEA3 | ||||
| 9575 | 80 aa hypothetical protein | |||
| 9580 | M | M.LsaCORF1536P (100% identity) | M.LsaCEA3ORF9580P | |
| 9585 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pMP1CEA3 | ||||
| 9525 | DEAD/DEAH box helicase family protein | |||
| 9530 | RM | LsaAR612ORF8680P (72% identity) | LsaCEA3ORF9530BP | |
| 9535 | restriction endonuclease subunit M | |||
| 9540 | RM | LsaGJ24ORF1799P (98% identity) | LsaCEA3ORF9530AP | |
| 9545 | DUF6339 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4940 | alpha-galactosidase | |||
| 4945 | R | LsaCORF835P (99% identity) | LsaCEA3ORF4945P | |
| 4950 | (deoxy)nucleoside triphosphate | |||
| 6595 | 109 aa hypothetical protein | |||
| 6600 | R | LsaAR612MrrP (100% identity) | LsaCEA3MrrP | |
| 6605 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 7075 | IMP dehydrogenase | |||
| 7080 | R | LsaAR612ORF7155P (100% identity) | LsaCEA3ORF7080P | |
| 7085 | tyrosine-protein phosphatase | |||