Escherichia coli RHB31-SO-C03 |
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Putative Escherichia coli RHB31-SO-C03 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,660,104 bp | CP099123 |
| plasmid unnamed1: | 196,295 bp | CP099124 |
| plasmid unnamed2: | 118,824 bp | CP099125 |
| plasmid unnamed3: | 110,641 bp | CP099126 |
REBASE acronym: Eco31SOC03
Org_num: 66486
All begin NFK49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9180 | 19 aa hypothetical protein | |||
| 9185 | S | S.Eco0673ORF9290P (57% identity) | S.Eco31SOC03ORF9185P | |
| 9190 | YecA family protein | |||
| 9195 | cold shock domain-containing protein | |||
| 9200 | R | Eco0673ORF9290P (100% identity) | Eco31SOC03ORF9185P | |
| 9205 | M48 family metallopeptidase | |||
| 19035 | DUF262 domain-containing HNH endonuclease family | |||
| 19040 | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | Eco31SOC03ORF19045P |
| 19045 | M | M.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | M.Eco31SOC03ORF19045P |
| 19050 | S | S.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | S.Eco31SOC03ORF19045P |
| 19055 | endoribonuclease SymE | |||
| plasmid unnamed2 | ||||
| 23980 | DNA polymerase III subunit theta | |||
| 23985 | M | M.Eco5008ORF340P (99% identity) | GAANNNNNNTAYG | M.Eco31SOC03ORF23985P |
| 23395 | S | S.Ecoi162ORF4671P (99% identity) | GAANNNNNNTAYG | S.Eco31SOC03ORF23985P |
| 23400 | R | EcoR31ORF22360P (100% identity) | GAANNNNNNTAYG | Eco31SOC03ORF23985P |
| 23405 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1710 | cell division protein DamX | |||
| 1715 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco31SOC03DamP |
| 1720 | ribulose-phosphate 3-epimerase | |||
| 2335 | DUF2556 family protein | |||
| 2340 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco31SOC03ORF2340P |
| 2345 | DNA-binding transcriptional regulator Fis | |||
| 10995 | DUF977 family protein | |||
| 11000 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco31SOC03ORF11000P | |
| 11005 | 139 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 22740 | 56 aa hypothetical protein | |||
| 22745 | M | M.StyCORF187P (100% identity) | CCWGG | M.Eco31SOC03ORF22745P |
| 22750 | thermonuclease family protein | |||
| 23280 | DNA-binding protein | |||
| 23285 | M | M.Ype21801ORF197P (100% identity) | M.Eco31SOC03ORF23285P | |
| 23290 | 273 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 23495 | SPFH domain-containing protein | |||
| 23510 | M | M.Sen9860ORF25540P (99% identity) | M.Eco31SOC03ORF23510P | |
| 23515 | recombination-associated protein RdgC | |||
| plasmid unnamed3 | ||||
| 24525 | 76 aa hypothetical protein | |||
| 24530 | M | M.EcoB1109aORFFP (100% identity) | M.Eco31SOC03ORF24530P | |
| 24535 | 269 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19055 | endoribonuclease SymE | |||
| ??? | R | EcoS14GmrSDP (100% identity) | Eco31SOC03GmrSDP | |
| 19070 | cytoplasmic protein | |||