Escherichia coli RHB23-SO-C06 |
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Putative Escherichia coli RHB23-SO-C06 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,793,898 bp | CP099169 |
| plasmid unnamed1: | 58,223 bp | CP099170 |
REBASE acronym: Eco23SOC06
Org_num: 66472
All begin NFK22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11840 | DUF4942 domain-containing protein | |||
| 11845 | M | M.EcoW26ORF3070P (100% identity) | CCANNNNNNCTC | M.Eco23SOC06ORF11845P |
| 11850 | S | S.SdyFF10ORF20075P (100% identity) | CCANNNNNNCTC | S.Eco23SOC06ORF11845P |
| 11855 | R | SdyFF10ORF20075P (100% identity) | CCANNNNNNCTC | Eco23SOC06ORF11845P |
| 11865 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1040 | phosphohydrolase | |||
| 1045 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco23SOC06DcmP |
| 1050 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco23SOC06DcmP |
| 1055 | drug/metabolite exporter YedA | |||
| 5370 | LexA family transcriptional regulator | |||
| 5375 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco23SOC06ORF5375P |
| 5380 | PerC family transcriptional regulator | |||
| 11385 | LexA family transcriptional regulator | |||
| 11390 | M | M.EcoTO6ORF3546P (100% identity) | GATC | M.Eco23SOC06ORF11390P |
| 11395 | PerC family transcriptional regulator | |||
| 12545 | transcriptional regulator | |||
| 12555 | M | M.Eco37C15ORF12455P (100% identity) | GGCGCC | M.Eco23SOC06ORF12555P |
| 12560 | R | Eco43SOC05ORF12795P (100% identity) | GGCGCC | Eco23SOC06ORF12555P |
| 12565 | C | C.Eco8E3C05ORF20755P (100% identity) | C.Eco23SOC06ORF12555P | |
| 12570 | lysine decarboxylation/transport transcriptional | |||
| 17135 | DUF2556 family protein | |||
| 17140 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco23SOC06ORF17140P |
| 17145 | DNA-binding transcriptional regulator Fis | |||
| plasmid unnamed1 | ||||
| 23205 | 83 aa hypothetical protein | |||
| 23210 | M | M.Sen624ORF24870P (100% identity) | M.Eco23SOC06ORF23210P | |
| 23215 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4860 | isocitrate/isopropylmalate family dehydrogenase | |||
| 4865 | R | EmaE2C08McrCP (100% identity) | Eco23SOC06McrCP | |
| 4870 | R | EmaE2C08McrBP (100% identity) | Eco23SOC06McrBP | |
| 4875 | tail fiber assembly protein | |||
| 5170 | isocitrate/isopropylmalate family dehydrogenase | |||
| 5175 | R | EcoRS76GmrSDP (100% identity) | Eco23SOC06GmrSDP | |
| 5180 | recombinase family protein | |||