Escherichia coli RHB23-SO-C02 |
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Putative Escherichia coli RHB23-SO-C02 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 3,483,309 bp | CP099173 |
| plasmid unnamed1: | 1,310,597 bp | CP099174 |
| plasmid unnamed2: | 58,223 bp | CP099175 |
REBASE acronym: Eco22SOC02
Org_num: 66471
All begin NFK20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5545 | DUF4942 domain-containing protein | |||
| 5550 | M | M.EcoW26ORF3070P (100% identity) | CCANNNNNNCTC | M.Eco22SOC02ORF5550P |
| 5555 | S | S.SdyFF10ORF20075P (100% identity) | CCANNNNNNCTC | S.Eco22SOC02ORF5550P |
| 5560 | R | SdyFF10ORF20075P (100% identity) | CCANNNNNNCTC | Eco22SOC02ORF5550P |
| 5570 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1040 | phosphohydrolase | |||
| 1045 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco22SOC02DcmP |
| 1050 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco22SOC02DcmP |
| 1055 | drug/metabolite exporter YedA | |||
| 5090 | LexA family transcriptional regulator | |||
| 5095 | M | M.EcoTO6ORF3546P (100% identity) | GATC | M.Eco22SOC02ORF5095P |
| 5100 | PerC family transcriptional regulator | |||
| 6250 | transcriptional regulator | |||
| 6260 | M | M.Eco37C15ORF12455P (100% identity) | GGCGCC | M.Eco22SOC02ORF6260P |
| 6265 | R | Eco43SOC05ORF12795P (100% identity) | GGCGCC | Eco22SOC02ORF6260P |
| 6270 | C | C.Eco8E3C05ORF20755P (100% identity) | C.Eco22SOC02ORF6260P | |
| 6275 | lysine decarboxylation/transport transcriptional | |||
| 10845 | DUF2556 family protein | |||
| 10850 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco22SOC02ORF10850P |
| 10855 | DNA-binding transcriptional regulator Fis | |||
| plasmid unnamed1 | ||||
| 21000 | LexA family transcriptional regulator | |||
| 21005 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco22SOC02ORF21005P |
| 21010 | PerC family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 23210 | 83 aa hypothetical protein | |||
| 23215 | M | M.Sen624ORF24870P (100% identity) | M.Eco22SOC02ORF23215P | |
| 23220 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4860 | isocitrate/isopropylmalate family dehydrogenase | |||
| 4865 | R | EmaE2C08McrCP (100% identity) | Eco22SOC02McrCP | |
| 4870 | R | EmaE2C08McrBP (100% identity) | Eco22SOC02McrBP | |
| 4875 | tail fiber assembly protein | |||
| plasmid unnamed1 | ||||
| 20800 | isocitrate/isopropylmalate family dehydrogenase | |||
| 20805 | R | EcoRS76GmrSDP (100% identity) | Eco22SOC02GmrSDP | |
| 20810 | recombinase family protein | |||