Escherichia coli RHB22-SO-C04 |
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Putative Escherichia coli RHB22-SO-C04 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
Complete sequence: 5,062,984 bp
GenBank #: CP099179
REBASE acronym: Eco22SOC04
Org_num: 66469
All begin NFK17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15195 | AAA family ATPase | |||
| 15200 | S | S.Eco22SOC05ORF15205P (100% identity) | S.Eco22SOC04ORF15205P | |
| 15205 | M | M.Eco6C06ORF720P (100% identity) | M.Eco22SOC04ORF15205P | |
| 15210 | R | Eco6C06ORF720P (100% identity) | Eco22SOC04ORF15205P | |
| 15215 | sce7726 family protein | |||
| 19115 | glycoprotein 3 | |||
| 19120 | M | M.Efe38C01ORF18910P (57% identity) | M.Eco22SOC04ORF19120P | |
| 19125 | IS3-like element IS2 family transposase | |||
| 19355 | endoribonuclease SymE | |||
| 19360 | S | S.EcoYPE10ORF21230P (100% identity) | S.Eco22SOC04ORF19365P | |
| 19365 | M | M.EcoYPE10ORF21230P (100% identity) | M.Eco22SOC04ORF19365P | |
| 19370 | IS3-like element IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3405 | 0 aa hypothetical protein | |||
| 3410 | M | M.SsoSE61ORF20220P (90% identity) | M.Eco22SOC04ORF3410P | |
| 3415 | cell division inhibition protein DicB | |||
| 5585 | drug/metabolite exporter YedA | |||
| 5590 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco22SOC04DcmP |
| 5595 | M | M.Eco40C09DcmP (100% identity) | CCWGG | M.Eco22SOC04DcmP |
| 5600 | phosphohydrolase | |||
| 9030 | replication endonuclease | |||
| 9035 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.Eco22SOC04ORF9035P |
| 9040 | TraR/DksA family transcriptional regulator | |||
| 10835 | IS66-like element accessory protein TnpA | |||
| 10840 | R | EcoA41ORF21415P (97% identity) | GGCGGA | Eco22SOC04ORF10845P |
| 10845 | M | M1.EcoA41ORF21415P (99% identity) | GGCGGA | M1.Eco22SOC04ORF10845P |
| 10850 | M | M2.EcoA41ORF21415P (100% identity) | GGCGGA | M2.Eco22SOC04ORF10845P |
| 10855 | conjugal transfer protein TraG N-terminal | |||
| 13095 | DNA-binding transcriptional regulator Fis | |||
| 13100 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco22SOC04ORF13100P |
| 13105 | DUF2556 family protein | |||
| 19155 | McrC family protein | |||
| 19160 | R | SflFF17ORF19275P (100% identity) | Eco22SOC04ORF19160P | |
| 19165 | HNH endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19135 | DUF4942 domain-containing protein | |||
| 19140 | R | EcoYPE3McrBP (73% identity) | Eco22SOC04McrBAP | |
| 19145 | IS3-like element IS3 family transposase | |||
| 19150 | R | Eco22SOC05McrBBP (100% identity) | Eco22SOC04McrBBP | |
| 19155 | R | EcoYPE3McrCP (100% identity) | Eco22SOC04McrCP | |
| 19160 | HNH endonuclease | |||
| 19340 | DUF1127 domain-containing protein | |||
| ??? | R | EcoSTEC508GmrSDP (100% identity) | Eco22SOC04GmrSDP | |
| 19355 | endoribonuclease SymE | |||