Escherichia marmotae RHB02-E4-C07 |
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Putative Escherichia marmotae RHB02-E4-C07 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,551,556 bp | CP099351 |
| plasmid unnamed1: | 116,771 bp | CP099352 |
| plasmid unnamed2: | 94,247 bp | CP099353 |
REBASE acronym: EfeE4C07
Org_num: 66609
All begin NFJ26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2745 | aminotransferase class I/II-fold pyridoxal | |||
| 2750 | R | Esp9308ORFIP (100% identity) | EfeE4C07ORF2760P | |
| 2755 | S | S.Esp9308ORFIP (100% identity) | S.EfeE4C07ORF2760P | |
| 2760 | M | M.Esp9308ORFIP (100% identity) | M.EfeE4C07ORF2760P | |
| 2765 | restriction endonuclease | |||
| plasmid unnamed1 | ||||
| 21995 | 3-phosphatase | |||
| 22000 | R | EcoH15ORF23945P (100% identity) | GAANNNNNNNNTTC | EfeE4C07ORF22010P |
| 22005 | S | S.EcoFec10I (100% identity) | GAANNNNNNNNTTC | S.EfeE4C07ORF22010P |
| 22010 | M | M.EcoRA119ORF26420P (100% identity) | GAANNNNNNNNTTC | M.EfeE4C07ORF22010P |
| 22015 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2495 | integrase arm-type DNA-binding domain-containing | |||
| 2500 | M | M.Esp9308ORFKP (100% identity) | CAGCTG | M.EfeE4C07ORF2500P |
| 2505 | C | C.SptAI (100% identity) | C.EfeE4C07ORF2500P | |
| 2510 | R | Eco313ORFJP (100% identity) | CAGCTG | EfeE4C07ORF2500P |
| 2515 | Polarity suppression protein | |||
| 12390 | drug/metabolite exporter YedA | |||
| 12395 | V | V.Esp9308DcmP (100% identity) | CCWGG | V.EfeE4C07DcmP |
| 12400 | M | M.Esp9308DcmP (100% identity) | CCWGG | M.EfeE4C07DcmP |
| 12405 | phosphohydrolase | |||
| 12775 | DUF2591 domain-containing protein | |||
| ??? | M | M.Esp9308ORFFP (100% identity) | GATC | M.EfeE4C07ORF12780P |
| 12790 | recombination protein NinB | |||
| 14730 | Com family DNA-binding transcriptional | |||
| 14735 | M | M.EcoS0756ORF16940P (99% identity) | M.EfeE4C07ORF14735P | |
| 14740 | flagella biosynthesis regulator Flk | |||
| 19020 | DNA-binding transcriptional regulator Fis | |||
| 19025 | M | M.Esp9308ORFJP (100% identity) | ATGCAT | M.EfeE4C07ORF19025P |
| 19030 | DUF2556 family protein | |||
| plasmid unnamed2 | ||||
| 22635 | 95 aa hypothetical protein | |||
| 22640 | M | M.Ema605ORF24555P (49% identity) | M.EfeE4C07ORF22640BP | |
| 22645 | M | M.Ema605ORF24555P (29% identity) | M.EfeE4C07ORF22640AP | |
| 22650 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2760 | type I restriction-modification system subunit | |||
| 2765 | R | EcoZ147MrrP (100% identity) | EfeE4C07MrrP | |
| 2770 | BrnT family toxin | |||
| 13380 | 115 aa hypothetical protein | |||
| 13385 | R | EmaE2C08ORF5935P (100% identity) | EfeE4C07ORF13385P | |
| 13390 | tyrosine-type recombinase/integrase | |||