Escherichia coli RHB47-C06 |
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Putative Escherichia coli RHB47-C06 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,851,599 bp | CP098947 |
| plasmid unnamed1: | 145,909 bp | CP098948 |
| plasmid unnamed2: | 6,334 bp | CP098949 |
REBASE acronym: Eco47C06
Org_num: 66544
All begin NFL56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3975 | 112 aa hypothetical protein | |||
| 3980 | R | Ero925ORF20445P (99% identity) | Eco47C06ORF3990P | |
| 3985 | S | S.Ero374ORF20025P (66% identity) | S.Eco47C06ORF3990P | |
| 3990 | M | M.EcoCP52EORF20935P (99% identity) | M.Eco47C06ORF3990P | |
| 3995 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 420 | IS66 family insertion sequence element accessory | |||
| 425 | M | M.Kox6895SspBP (83% identity) | M.Eco47C06SspBP | |
| 430 | M | M.Eco09C22SspCP (99% identity) | M.Eco47C06SspCP | |
| 435 | M | M.Yru11073SspDP (92% identity) | M.Eco47C06SspDP | |
| 440 | DUF262 domain-containing HNH endonuclease family | |||
| 1895 | cell division protein DamX | |||
| 1900 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco47C06DamP |
| 1905 | ribulose-phosphate 3-epimerase | |||
| 2450 | DUF2556 family protein | |||
| 2455 | M | M.Eco21C11ORF2220P (100% identity) | ATGCAT | M.Eco47C06ORF2455P |
| 2460 | DNA-binding transcriptional regulator Fis | |||
| 6560 | HigA family addiction module antitoxin | |||
| 6565 | M | M.Eco18C18ORF21820P (100% identity) | CTCGAG | M.Eco47C06ORF6565P |
| 6570 | R | Kps623ORF16620P (100% identity) | CTCGAG | Eco47C06ORF6565P |
| 6575 | AAA family ATPase | |||
| 9200 | phosphohydrolase | |||
| 9205 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco47C06DcmP |
| 9210 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.Eco47C06DcmP |
| 9215 | drug/metabolite exporter YedA | |||
| 13725 | phage holin, lambda family | |||
| 13730 | M | M.Eco64036ORF1885P (100% identity) | M.Eco47C06ORF13730P | |
| 13735 | TrmB family transcriptional regulator | |||
| 17095 | DUF1317 domain-containing protein | |||
| 17100 | M | M.EcoRG065ORF8075P (100% identity) | M.Eco47C06ORF17100P | |
| 17105 | cell division protein ZapA | |||
| plasmid unnamed1 | ||||
| 23825 | 73 aa hypothetical protein | |||
| 23830 | M | M.EcoSCU488ORF25195P (100% identity) | M.Eco47C06ORF23830P | |
| 23835 | 103 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 24100 | MobC family plasmid mobilization relaxosome | |||
| 24105 | R | Sens733ORF23630P (100% identity) | Eco47C06ORF24110P | |
| 24110 | M | M.Kqu1503ORF26385P (100% identity) | M.Eco47C06ORF24110P | |
| 24115 | sigma-70 region 4 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13555 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13560 | R | Efe1438GmrSDP (100% identity) | Eco47C06GmrSDP | |
| 13565 | recombinase family protein | |||