Escherichia coli RHB46-C16 |
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Putative Escherichia coli RHB46-C16 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,720,637 bp | CP098979 |
| plasmid unnamed1: | 107,839 bp | CP098980 |
REBASE acronym: Eco46C16
Org_num: 66530
All begin NFL48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9195 | 388 aa hypothetical protein | |||
| 9200 | M | M.EcoVEF10ORF18030P (100% identity) | M.Eco46C16ORF9200P | |
| 9205 | S | S1.EcoVEF10ORF18030P (100% identity) | S1.Eco46C16ORF9200P | |
| 9210 | YecA family protein | |||
| 9215 | cold shock domain-containing protein | |||
| 9220 | R | Eho6ORF15610P (99% identity) | Eco46C16ORF9200P | |
| 9225 | M48 family metallopeptidase | |||
| 14775 | GTPase family protein | |||
| 14780 | M | M.Eco47C06ORF20265P (99% identity) | M.Eco46C16ORF14780P | |
| 14785 | S | S.EcoEA7ORF3705P (99% identity) | S1.Eco46C16ORF14780P | |
| 14790 | R | EcoPSS10ORF26960P (99% identity) | Eco46C16ORF14780P | |
| ??? | S | S.Eco1201CCORFAP (73% identity) | S2.Eco46C16ORF14780P | |
| 14800 | two-component system response regulator DcuR | |||
| plasmid unnamed1 | ||||
| 23315 | 3-phosphatase | |||
| 23320 | R | EcoS1632ORFBP (100% identity) | Eco46C16ORF23330P | |
| 23325 | S | S1.EcoP61ORF22960P (100% identity) | S1.Eco46C16ORF23330P | |
| 23330 | M | M.EcosS142ORF43560P (100% identity) | M.Eco46C16ORF23330P | |
| 23335 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1715 | cell division protein DamX | |||
| 1720 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco46C16DamP |
| 1725 | ribulose-phosphate 3-epimerase | |||
| 2340 | DUF2556 family protein | |||
| 2345 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco46C16ORF2345P |
| 2350 | DNA-binding transcriptional regulator Fis | |||
| 3980 | DEAD/DEAH box helicase | |||
| 3985 | RM | Eco4GORF3785P (100% identity) | Eco46C16ORF3985P | |
| 8885 | HD domain-containing protein | |||
| 8890 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco46C16DcmP |
| 8895 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco46C16DcmP |
| 8900 | drug/metabolite exporter YedA | |||
| 13360 | phage holin, lambda family | |||
| 13365 | M | M.SflFF34ORF18205P (100% identity) | M.Eco46C16ORF13365P | |
| 13370 | TrmB family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13185 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13190 | R | EcoMB19ORF20745P (100% identity) | YCGR | Eco46C16ORF13190P |
| 13195 | site-specific DNA recombinase | |||