Escherichia coli RHB45-SO-C05 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB45-SO-C05 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
Complete sequence: 4,819,084 bp
GenBank #: CP099008
REBASE acronym: Eco45S0C05
Org_num: 66524
All begin NFL37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19810 | DUF262 domain-containing HNH endonuclease family | |||
| 19815 | R | SflN107ORF19785P (100% identity) | Eco45S0C05ORF19820P | |
| 19820 | M | M.Ema777ORF2985P (99% identity) | M.Eco45S0C05ORF19820P | |
| 19825 | S | S.Eco19C14ORF20475P (100% identity) | S.Eco45S0C05ORF19820P | |
| 19830 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1770 | cell division protein DamX | |||
| 1775 | M | M.Fnu048ORFTP (100% identity) | GATC | M.Eco45S0C05DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2370 | DUF2556 family protein | |||
| 2375 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco45S0C05ORF2375P |
| 2380 | DNA-binding transcriptional regulator Fis | |||
| 5590 | TraR/DksA family transcriptional regulator | |||
| 5595 | M | M.SspS13ORF8710P (99% identity) | GATC | M.Eco45S0C05ORF5595P |
| 5600 | replication endonuclease | |||
| 7235 | recombination protein NinB | |||
| 7240 | M | M.EphIME10ORFAP (96% identity) | GATC | M.Eco45S0C05ORF7240P |
| 7245 | NinE family protein | |||
| 20025 | HNH endonuclease | |||
| 20030 | R | Ecoi362ORF3874P (99% identity) | Eco45S0C05ORF20030P | |
| 20035 | helicase YjhR | |||
| 20060 | IS3 family transposase | |||
| 20065 | M | M1.Eco8E3C05ORF19565P (100% identity) | M1.Eco45S0C05ORF20065P | |
| 20070 | M | M2.Eco8E3C05ORF19565P (100% identity) | M2.Eco45S0C05ORF20065P | |
| 20075 | RM | Eco8E3C05ORF19565P (99% identity) | Eco45S0C05ORF20065P | |
| 20080 | tyrosine-type recombinase/integrase | |||
| 20790 | transcriptional regulator | |||
| 20800 | M | M.Eco8E3C05ORF20755P (100% identity) | GGCGCC | M.Eco45S0C05ORF20800P |
| 20805 | R | Eco8E3C05ORF20755P (100% identity) | GGCGCC | Eco45S0C05ORF20800P |
| 20810 | C | C.Eco8E3C05ORF20755P (100% identity) | C.Eco45S0C05ORF20800P | |
| 20815 | lysine decarboxylation/transport transcriptional | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19830 | endoribonuclease SymE | |||
| 19835 | R | EcoVCSW5GmrSDP (55% identity) | Eco45S0C05GmrSDBP | |
| 19840 | R | EcoVCSW5GmrSDP (42% identity) | Eco45S0C05GmrSDAP | |
| 19845 | 15 aa hypothetical protein | |||