Escherichia coli RHB13-SO-C08 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB13-SO-C08 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
Complete sequence: 4,790,290 bp
GenBank #: CP099220
REBASE acronym: Eco13SOC08
Org_num: 66454
All begin NFJ79_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 720 | phosphohydrolase | |||
| 725 | M | M.EcoVCSW8DcmP (100% identity) | CCWGG | M.Eco13SOC08DcmP |
| 730 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco13SOC08DcmP |
| 735 | drug/metabolite exporter YedA | |||
| 2760 | DUF977 family protein | |||
| 2765 | M | M.Ecoi029ORF11125P (100% identity) | M.Eco13SOC08ORF2765P | |
| 2770 | 139 aa hypothetical protein | |||
| 5230 | site-specific integrase | |||
| 5235 | M | M.EcoL65ORF1595P (100% identity) | M.Eco13SOC08ORF5235P | |
| 5240 | AAA family ATPase | |||
| 11565 | HNH endonuclease | |||
| 11570 | R | SflFF16ORF19630P (100% identity) | Eco13SOC08ORF11570P | |
| 11575 | IS3 family transposase | |||
| 11590 | phospholipase D family protein | |||
| 11595 | M | M.SflWW1ORF19920P (100% identity) | CCCAGA | M.Eco13SOC08ORF11595P |
| 11600 | integrase arm-type DNA-binding domain-containing | |||
| 17020 | DUF2556 family protein | |||
| 17025 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco13SOC08ORF17025P |
| 17030 | DNA-binding transcriptional regulator Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4960 | isocitrate/isopropylmalate family dehydrogenase | |||
| ??? | R | EcoSW4848GmrSD2P (99% identity) | Eco13SOC08GmrSDP | |
| 4975 | recombinase family protein | |||