Escherichia coli RHB40-SO-C05 |
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Putative Escherichia coli RHB40-SO-C05 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 5,080,392 bp | CP099108 |
| plasmid unnamed1: | 106,354 bp | CP099109 |
REBASE acronym: Eco40SOC05
Org_num: 66491
All begin NFK65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16390 | DUF600 family protein | |||
| 16395 | R | EcoJNUORF15575P (100% identity) | Eco40SOC05ORF16400P | |
| 16400 | M | M.EcoJNUORF15575P (100% identity) | M.Eco40SOC05ORF16400P | |
| 16405 | S | S.Eco8SOC05ORF4105P (99% identity) | S.Eco40SOC05ORF16400P | |
| 16410 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 730 | phosphohydrolase | |||
| 735 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco40SOC05DcmP |
| 740 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco40SOC05DcmP |
| 745 | drug/metabolite exporter YedA | |||
| 1330 | TrmB family transcriptional regulator | |||
| 1335 | M | M.EcoEC11ORF25220P (99% identity) | M.Eco40SOC05ORF1335P | |
| 1340 | 201 aa hypothetical protein | |||
| 1515 | tail fiber assembly protein | |||
| 1520 | M | M.Eco45SOC03ORF9490P (100% identity) | M.Eco40SOC05ORF1520P | |
| 1525 | R | Sso8033ORF3755P (100% identity) | CCWGG | Eco40SOC05ORF1520P |
| 1530 | 33 aa hypothetical protein | |||
| 12240 | LexA family transcriptional regulator | |||
| 12245 | M | M.EcoT761ORF20590P (100% identity) | GATC | M.Eco40SOC05ORF12245P |
| 12250 | PerC family transcriptional regulator | |||
| 12680 | HNH endonuclease | |||
| 12685 | R | EcoWCTORF19980P (99% identity) | Eco40SOC05ORF12685P | |
| 12690 | McrC family protein | |||
| 12745 | HNH endonuclease | |||
| 12750 | M | M.Kae6ORF3710P (93% identity) | M.Eco40SOC05ORF12750P | |
| 12755 | recombinase family protein | |||
| 17930 | cell division protein DamX | |||
| 17935 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco40SOC05DamP |
| 17940 | ribulose-phosphate 3-epimerase | |||
| 18485 | DUF2556 family protein | |||
| 18490 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco40SOC05ORF18490P |
| 18495 | DNA-binding transcriptional regulator Fis | |||
| 23185 | 126 aa hypothetical protein | |||
| 23190 | M | M.EcoM17ORF9780P (100% identity) | M.Eco40SOC05ORF23190P | |
| 23195 | helix-turn-helix domain-containing protein | |||
| plasmid unnamed1 | ||||
| 25380 | 73 aa hypothetical protein | |||
| 25385 | M | M.SflN92ORF24820P (99% identity) | M.Eco40SOC05ORF25385P | |
| 25390 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12685 | HNH endonuclease | |||
| 12690 | R | EcoZ151McrCP (100% identity) | Eco40SOC05McrCP | |
| 12695 | R | SflSTLE4McrBP (100% identity) | Eco40SOC05McrBP | |
| 12700 | IS3-like element IS3 family transposase | |||