Escherichia coli RHB34-SO-C08 |
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Putative Escherichia coli RHB34-SO-C08 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
Complete sequence: 4,739,754 bp
GenBank #: CP099118
REBASE acronym: Eco31SOC08
Org_num: 66489
All begin NFK53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11545 | restriction endonuclease | |||
| 11550 | M | M.Esp9308ORFIP (100% identity) | CGTANNNNNGTC | M.Eco31SOC08ORF11550P |
| 11555 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.Eco31SOC08ORF11550P |
| 11560 | R | EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | Eco31SOC08ORF11550P |
| 11565 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 815 | phosphohydrolase | |||
| 820 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco31SOC08DcmP |
| 825 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco31SOC08DcmP |
| 830 | drug/metabolite exporter YedA | |||
| 2825 | DUF977 family protein | |||
| 2830 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco31SOC08ORF2830P | |
| 2835 | 139 aa hypothetical protein | |||
| 6855 | 273 aa hypothetical protein | |||
| 6860 | M | M.Eco9054ORF3699P (100% identity) | M.Eco31SOC08ORF6860P | |
| 6865 | TraR/DksA family transcriptional regulator | |||
| 7480 | NinE family protein | |||
| 7485 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco31SOC08ORF7485P |
| 7490 | recombination protein NinB | |||
| 17060 | DUF2556 family protein | |||
| 17065 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco31SOC08ORF17065P |
| 17070 | DNA-binding transcriptional regulator Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5130 | isocitrate/isopropylmalate family dehydrogenase | |||
| 5135 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco31SOC08ORF5135P |
| 5140 | site-specific DNA recombinase | |||
| 11540 | BrnT family toxin | |||
| 11545 | R | EfeE4C07MrrP (100% identity) | Eco31SOC08MrrP | |
| 11550 | type I restriction-modification system subunit | |||