Escherichia fergusonii RHB44-C01 |
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Putative Escherichia fergusonii RHB44-C01 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,495,859 bp | CP099338 |
| plasmid unnamed1: | 108,225 bp | CP099339 |
| plasmid unnamed2: | 99,935 bp | CP099340 |
| plasmid unnamed3: | 87,118 bp | CP099341 |
REBASE acronym: Efe44C01
Org_num: 66606
All begin NFK94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18300 | 322 aa hypothetical protein | |||
| 18305 | R | Efe4045ORF12170P (99% identity) | Efe44C01ORF18310P | |
| 18310 | M | M.SspS13ORF3945P (100% identity) | M.Efe44C01ORF18310P | |
| 18315 | S | S.Efe4045ORF12170P (100% identity) | S.Efe44C01ORF18310P | |
| 18320 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1205 | bifunctional isocitrate dehydrogenase | |||
| 1210 | M | M.EfeTORF2210P (100% identity) | CCWGG | M.Efe44C01ORF1210P |
| 1215 | glyoxylate bypass operon transcriptional | |||
| 1630 | PerC family transcriptional regulator | |||
| 1635 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Efe44C01ORF1635P |
| 1640 | LexA family transcriptional regulator | |||
| 1670 | 67 aa hypothetical protein | |||
| 1675 | M | M.Sso63633ORF22290P (100% identity) | M.Efe44C01ORF1675P | |
| 1680 | phage lysis protein EssD | |||
| 13560 | NinE family protein | |||
| 13565 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Efe44C01ORF13565P |
| 13570 | recombination protein NinB | |||
| 16595 | LexA family transcriptional regulator | |||
| 16600 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Efe44C01ORF16600P |
| 16605 | PerC family transcriptional regulator | |||
| 18390 | anti-phage defense ZorAB system protein ZorA | |||
| 18395 | M | M.Efe9LTDndBP (100% identity) | M.Efe44C01DndBP | |
| 18400 | DNA phosphorothioation system sulfurtransferase | |||
| 18395 | DNA sulfur modification protein DndB | |||
| 18400 | M | M.Efe9LTDndCP (100% identity) | M.Efe44C01DndCP | |
| 18405 | DNA sulfur modification protein DndD | |||
| 18400 | DNA phosphorothioation system sulfurtransferase | |||
| 18405 | M | M.Efe9LTDndDP (100% identity) | M.Efe44C01DndDP | |
| 18410 | DNA sulfur modification protein DndE | |||
| 18405 | DNA sulfur modification protein DndD | |||
| 18410 | M | M.Efe9LTDndEP (100% identity) | M.Efe44C01DndEP | |
| 18415 | DGQHR domain-containing protein | |||
| 18420 | 174 aa hypothetical protein | |||
| 18425 | R | Efe4045DptHP (100% identity) | Efe44C01DptHP | |
| 18430 | DNA phosphorothioation-dependent restriction | |||
| 18425 | DNA phosphorothioation-dependent restriction | |||
| 18430 | R | Efe9LTDptGP (100% identity) | Efe44C01DptGP | |
| 18435 | DNA phosphorothioation-dependent restriction | |||
| 18430 | DNA phosphorothioation-dependent restriction | |||
| 18435 | R | Efe9LTDptFP (100% identity) | Efe44C01DptFP | |
| 18440 | integrase arm-type DNA-binding domain-containing | |||
| 19085 | DNA-binding transcriptional regulator Fis | |||
| 19090 | M | M.EfeC18ORF19205P (100% identity) | ATGCAT | M.Efe44C01ORF19090P |
| 19095 | DUF2556 family protein | |||
| plasmid unnamed1 | ||||
| 21975 | 103 aa hypothetical protein | |||
| 21980 | M | M.StyR64ORFAP (100% identity) | M.Efe44C01ORF21980P | |
| 21985 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 22710 | 156 aa hypothetical protein | |||
| 22720 | M | M.Efe44C03ORF22840P (99% identity) | M.Efe44C01ORF22720P | |
| 22725 | recombination-associated protein RdgC | |||
| plasmid unnamed3 | ||||
| 23155 | 103 aa hypothetical protein | |||
| 23160 | M | M.SflN101ORF24625P (93% identity) | M.Efe44C01ORF23160P | |
| 23165 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18320 | endoribonuclease SymE | |||
| 18325 | R | EcoE1373GmrSDP (55% identity) | Efe44C01GmrSDBP | |
| 18330 | R | SflWW1GmrSDP (42% identity) | Efe44C01GmrSDAP | |
| 18335 | 15 aa hypothetical protein | |||
| 18360 | IS66 family transposase | |||
| 18365 | R | Efe4045MrrP (100% identity) | Efe44C01MrrP | |
| 18370 | IS3 family transposase | |||