Escherichia coli RHB43-C14 |
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Putative Escherichia coli RHB43-C14 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
Complete sequence: 4,868,848 bp
GenBank #: CP099087
REBASE acronym: Eco43C14
Org_num: 66498
All begin NFK77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18790 | endoribonuclease SymE | |||
| 18795 | R | EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | Eco43C14ORF18805P |
| 18800 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.Eco43C14ORF18805P |
| 18805 | M | M.Esp9308ORFIP (100% identity) | CGTANNNNNGTC | M.Eco43C14ORF18805P |
| 18810 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15 | 501 aa hypothetical protein | |||
| 20 | M | M.Ecoww7ORF20P (100% identity) | TGGCCA | M.Eco43C14ORF20P |
| 25 | phage portal protein | |||
| 1390 | TrmB family transcriptional regulator | |||
| 1395 | M | M.Eco0133ORF9780P (98% identity) | M.Eco43C14ORF1395P | |
| 1410 | tellurite/colicin resistance protein | |||
| 4105 | 95 aa hypothetical protein | |||
| 4110 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco43C14ORF4110P | |
| 4115 | DUF977 family protein | |||
| 6345 | drug/metabolite exporter YedA | |||
| 6350 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco43C14DcmP |
| 6355 | M | M.SspS13DcmP (99% identity) | CCWGG | M.Eco43C14DcmP |
| 6360 | phosphohydrolase | |||
| 13160 | DNA-binding transcriptional regulator Fis | |||
| 13165 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco43C14ORF13165P |
| 13170 | DUF2556 family protein | |||
| 13785 | ribulose-phosphate 3-epimerase | |||
| 13790 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco43C14DamP |
| 13795 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15215 | 192 aa hypothetical protein | |||
| 15220 | R | Ecow264ORF380P (99% identity) | GTCTC | Eco43C14ORF15225P |
| 15225 | M | M.SflFF17ORF4015P (100% identity) | GTCTC | M.Eco43C14ORF15225P |
| 15230 | AIPR family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1990 | tail fiber assembly protein | |||
| 1995 | R | Ecos15955McrBP (99% identity) | Eco43C14McrBP | |
| 2000 | R | EmaE2C08McrCP (100% identity) | Eco43C14McrCP | |
| 2005 | isocitrate/isopropylmalate family dehydrogenase | |||
| 18805 | type I restriction-modification system subunit | |||
| 18810 | R | EfeE4C07MrrP (100% identity) | Eco43C14MrrP | |
| 18815 | BrnT family toxin | |||