Escherichia coli RHB17-SO-C08 |
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Putative Escherichia coli RHB17-SO-C08 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,844,077 bp | CP099205 |
| plasmid unnamed1: | 91,334 bp | CP099206 |
REBASE acronym: Eco17SOC08
Org_num: 66459
All begin NFJ96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19685 | adenine/cytosine-specific restriction | |||
| 19690 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | Eco17SOC08ORF19695P |
| 19695 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.Eco17SOC08ORF19695P |
| 19700 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.Eco17SOC08ORF19695P |
| 19705 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco17SOC08DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.SflSTLE4ORF2240P (99% identity) | ATGCAT | M.Eco17SOC08ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 5995 | TraR/DksA family transcriptional regulator | |||
| 6000 | M | M.Eco081ORF4563P (100% identity) | GATC | M.Eco17SOC08ORF6000P |
| 6005 | replication endonuclease | |||
| 9255 | phosphohydrolase | |||
| 9260 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.Eco17SOC08DcmP |
| 9265 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco17SOC08DcmP |
| 9270 | drug/metabolite exporter YedA | |||
| 11200 | DUF977 family protein | |||
| 11205 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco17SOC08ORF11205P | |
| 11210 | 139 aa hypothetical protein | |||
| 20815 | 130 aa hypothetical protein | |||
| 20820 | M | M.Sen523ORF9345P (99% identity) | M.Eco17SOC08ORF20820P | |
| 20825 | N-6 DNA methylase | |||
| 21620 | site-specific integrase | |||
| 21625 | M | M2.Vspsp1ORF5975P (63% identity) | M1.Eco17SOC08ORF21625P | |
| 21630 | M | M1.Vspsp1ORF5975P (76% identity) | M2.Eco17SOC08ORF21625P | |
| 21635 | tail fiber assembly protein | |||
| plasmid unnamed1 | ||||
| 24100 | 73 aa hypothetical protein | |||
| 24105 | M | M.Sen17222ORF24050P (98% identity) | M.Eco17SOC08ORF24105P | |
| 24110 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19680 | GTPase | |||
| 19685 | R | Ssp28760MrrP (100% identity) | Eco17SOC08MrrP | |
| 19690 | type I restriction-modification system | |||