Escherichia coli RHB17-SO-C05 |
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Putative Escherichia coli RHB17-SO-C05 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
Complete sequence: 4,940,847 bp
GenBank #: CP099208
REBASE acronym: Eco17SOC05
Org_num: 66457
All begin NFJ94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20205 | adenine/cytosine-specific restriction | |||
| 20210 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco17SOC05ORF20215P |
| 20215 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco17SOC05ORF20215P |
| 20220 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco17SOC05ORF20215P |
| 20225 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2005 | cell division protein DamX | |||
| 2010 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco17SOC05DamP |
| 2015 | ribulose-phosphate 3-epimerase | |||
| 2560 | DUF2556 family protein | |||
| 2565 | M | M.Eco28C15ORF2475P (100% identity) | ATGCAT | M.Eco17SOC05ORF2565P |
| 2570 | DNA-binding transcriptional regulator Fis | |||
| 6235 | TraR/DksA family transcriptional regulator | |||
| 6240 | M | M.SenG094ORF11761P (100% identity) | GATC | M.Eco17SOC05ORF6240P |
| 6245 | replication endonuclease | |||
| 8405 | IS3 family transposase | |||
| 8410 | RM | EcoUKORF1518P (100% identity) | Eco17SOC05ORF8410P | |
| 8415 | DEAD/DEAH box helicase family protein | |||
| 9635 | phosphohydrolase | |||
| 9640 | M | M.Eco25C23DcmP (100% identity) | CCWGG | M.Eco17SOC05DcmP |
| 9645 | V | V.SdySWHE2DcmP (100% identity) | V.Eco17SOC05DcmP | |
| 9650 | drug/metabolite exporter YedA | |||
| 11615 | DUF977 family protein | |||
| 11620 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco17SOC05ORF11620P | |
| 11625 | 139 aa hypothetical protein | |||
| 18615 | DUF1317 domain-containing protein | |||
| 18620 | M | M.EfeC13ORF14690P (100% identity) | M.Eco17SOC05ORF18620P | |
| 18625 | cell division protein ZapA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20225 | endoribonuclease SymE | |||
| 20230 | R | SenHNK130McrBP (100% identity) | Eco17SOC05McrBP | |
| 20235 | R | SenHNK130McrCP (100% identity) | Eco17SOC05McrCP | |