Escherichia coli RHB02-E1-C06 |
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Putative Escherichia coli RHB02-E1-C06 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
Complete sequence: 4,869,391 bp
GenBank #: CP099299
REBASE acronym: Eco2E1C06
Org_num: 66431
All begin NFJ19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1960 | NADPH-dependent aldehyde reductase Ahr | |||
| 1970 | R | EcoPSJ29ORF37430P (100% identity) | Eco2E1C06ORF1980P | |
| 1975 | IS3-like element IS3 family transposase | |||
| 1980 | M | M.SsoSE61ORF6540P (14% identity) | M.Eco2E1C06ORF1980P | |
| 1985 | DUF4942 domain-containing protein | |||
| 2200 | endoribonuclease SymE | |||
| ??? | S | S.EcoPE15ORF18630P (100% identity) | CCANNNNNNNRTAYG | S.Eco2E1C06ORF2215P |
| 2215 | M | M.EcoPSJ29ORF36940P (100% identity) | CCANNNNNNNRTAYG | M.Eco2E1C06ORF2215P |
| 2220 | R | EcoPSJ29ORF36940P (100% identity) | CCANNNNNNNRTAYG | Eco2E1C06ORF2215P |
| 2225 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1995 | McrC family protein | |||
| 2000 | R | EcoPSJ29ORF37350P (100% identity) | Eco2E1C06ORF2000P | |
| 2005 | HNH endonuclease | |||
| 12555 | drug/metabolite exporter YedA | |||
| 12560 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.Eco2E1C06DcmP |
| 12565 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2E1C06DcmP |
| 12570 | phosphohydrolase | |||
| 12955 | NinE family protein | |||
| 12960 | M | M.EcoWN4ORF7335P (100% identity) | GATC | M.Eco2E1C06ORF12960P |
| 12965 | recombination protein NinB | |||
| 15985 | PerC family transcriptional regulator | |||
| 15990 | M | M.EcoS566ORF6785P (99% identity) | M.Eco2E1C06ORF15990P | |
| 15995 | DUF1382 family protein | |||
| 18265 | RM | EcoR0233ORF3995P (100% identity) | Eco2E1C06ORF18265P | |
| 18270 | DEAD/DEAH box helicase | |||
| 20530 | ribulose-phosphate 3-epimerase | |||
| 20535 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2E1C06DamP |
| 20540 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1985 | DUF4942 domain-containing protein | |||
| 1990 | R | EcoPSJ29McrB2P (100% identity) | Eco2E1C06McrB2P | |
| 1995 | R | EcoPSJ29McrC2P (100% identity) | Eco2E1C06McrC2P | |
| 2000 | HNH endonuclease | |||
| 2190 | R | EcoPSJ29McrCP (100% identity) | Eco2E1C06McrCP | |
| 2195 | R | EcoPSJ29McrBP (99% identity) | Eco2E1C06McrBP | |
| 2200 | endoribonuclease SymE | |||
| 2220 | type I restriction-modification system | |||
| 2225 | R | EcoPSJ29MrrP (100% identity) | Eco2E1C06MrrP | |
| 2230 | GTPase | |||