Escherichia coli WF5-5-T2 |
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Putative Escherichia coli WF5-5-T2 RM systems
Ref: Liu,B.-T. unpublished
REBASE ref # 36548
| Sequence length: | GenBank #: | |
| Chromosome: | 4,576,054 bp | CP049112 |
| plasmid pWF5_MCR: | 254,290 bp | CP049114 |
| plasmid pWF5_NDM: | 183,610 bp | CP049113 |
REBASE acronym: EcoWF55T2
Org_num: 66559
All begin G6R06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18805 | Mrr restriction system protein | |||
| 18810 | R | EcoWF55T1ORF18790P (100% identity) | AACNNNNNNGTGC | EcoWF55T2ORF18815P |
| 18815 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoWF55T2ORF18815P |
| 18820 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoWF55T2ORF18815P |
| 18825 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2445 | DNA-binding transcriptional regulator Fis | |||
| 2450 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoWF55T2ORF2450P |
| 2455 | DUF2556 family protein | |||
| 3080 | ribulose-phosphate 3-epimerase | |||
| 3085 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoWF55T2DamP |
| 3090 | cell division protein DamX | |||
| 8795 | phosphohydrolase | |||
| 8800 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoWF55T2DcmP |
| 8805 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoWF55T2DcmP |
| 8810 | drug/metabolite exporter YedA | |||
| plasmid pWF5_MCR | ||||
| 23840 | 284 aa hypothetical protein | |||
| 23845 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoWF55T2ORF23845P |
| 23850 | DNA-binding protein | |||
| 23960 | 202 aa hypothetical protein | |||
| 23965 | M | M.YpsF1ORFBP (100% identity) | M.EcoWF55T2ORF23965P | |
| 23970 | 48 aa hypothetical protein | |||
| 24540 | thermonuclease family protein | |||
| 24545 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoWF55T2ORF24545P |
| 24550 | 55 aa hypothetical protein | |||
| plasmid pWF5_NDM | ||||
| 23065 | 100 aa hypothetical protein | |||
| 23070 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.EcoWF55T2ORF23070P |
| 23075 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18800 | GTPase | |||
| 18805 | R | SenHNK130MrrP (100% identity) | EcoWF55T2MrrP | |
| 18810 | type I restriction-modification system | |||